Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2984 ATGGGAAATAACTGTGTTGGAACGAGAAAAACTCTAAAGGATGGACAAGTTCACACACCTAAGAATTCAAAGTGCTGTGCTCCATTCACAAGGGGAAAGGTTACAAACTATGCTGCAGCATCAAGTGAAAAACCGAATGCCTCAGACGCCAACAACGTTCAAAACAAGCCTCCAGAGGTAGTGAAAATTGATAAGGAGGACCAACACACAAAGCCTTCAAATTCAGGACAAAAAAGGCATGCAGAGGATGGAAAAGCCACCAAAAGGGAAGAGTCTGCGGGACCAAAGAAGCCACACAATGTGAGGAGGCAAGCAGTTGCAGGGCTACAAACAGACTCGGTGTTGCAGACGAAAAGTGGGAATCTGAAGGAGTTCTACAATTTAGGAAGGAAGCTTGGGAGTGGCCAATTCGGGACGACATTCCATTGTGTAGAGAAGGACACAGGGAAAGAGTACGCGTGCAAGTCCATCGCGAAGAGGAAGCTGGTGACACAGGAAGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCATCACTTGGCAGGGTGTTCTGATGTGATCTCCATCAAAGGGGCTTATGAGGATGCTGTGGCAGTTCATGTTGTGATGGAGTTGTGTGCTGGAGGTGAGCTGTTTGATAGGATTGTGCAGAGAGGGCATTACACTGAGAGAAAAGCAGCTAAAATAGCCAGGACTGTAGTTAGTGTTATAGAAGCTTGTCATTCCCTTGGAGTAATGCATCGTGATCTTAAGCCTGAGAATTTCCTCTTTGTTAATGAGGATGAAGAATCCCCCCTTAAGGCTATCGATTTCGGTTTGTCTGCTTTCTTCAAACCAGGGGACATATTTAATGATGTGGTAGGAAGCCCTTACTATGTTGCGCCAGAAGTACTGAGGAAGCGTTATGGTCCAGAATCTGATGTGTGGAGTGCTGGTGTGATCATATTCATTCTATTATGTGGGGTGCCTCCGTTTTGGGCTGAAACGGAGCAAGCGATATTTAAGGAGGTTTTGCATGGTAATCTTGATTTCACGTCAGACCCCTGGCCTAATATCTCTGAAGGTGCAAAGGACTTGGTTAGGAAGATGCTTGTTAGAGATCCTACCAAAAGACTAACAGCCCATGAAGTTCTTTGTCATCCTTGGATTCAAGATGATGAAGCAGCTCCTGATAAGCCTCTTGACTCTGCAGTTCTGAGTCGGTTGAAGCAGTTCTCTGCAATGAACAAGCTCAAAAAAATGGCTCTTAGAGTCATTGCAAAGAACCTGTCAGAAGAAGAAATCGCAGGGTTGAAAGAAATGTTTAAGATGATAGACACAGACAACAGTGGTCAAATTACTTATGAAGAACTTAAGGATGGATTGAAAAGATTCGGTGCTAACATCGAAGAATCTGAAATACACCATCTAATGCTTGCTGCAGATGTGGATAACAGTGGGTCAATAGATTATGCAGAATTCATAGCAGCAACATTGCATGTGAACAAAGTAGAGAGGGAAGATAACTTAGTAGCTGCTTTTGCATATTTTGACAAAGACGGAAGTGGCTACATCACGAAAGACGAGCTTCAACAAGCTTGTGAAGAATTTGGCATGGAGGATGTGGAGGAAATGATGCGTGAAGCTGATCAAGATAATGATGGCCGGATAGACTACAATGAATTTGTGGCTATGATGCAGAGAGGCAATGCAGATTTGGGTAAGAGGGGAGTAAGGCGAAACAATAGTGTTAGAGTTGGATATAGGGAAGAACTATCAGTATGCTAA 1770 0.439 MGNNCVGTRKTLKDGQVHTPKNSKCCAPFTRGKVTNYAAASSEKPNASDANNVQNKPPEVVKIDKEDQHTKPSNSGQKRHAEDGKATKREESAGPKKPHNVRRQAVAGLQTDSVLQTKSGNLKEFYNLGRKLGSGQFGTTFHCVEKDTGKEYACKSIAKRKLVTQEDVEDVRREIQIMHHLAGCSDVISIKGAYEDAVAVHVVMELCAGGELFDRIVQRGHYTERKAAKIARTVVSVIEACHSLGVMHRDLKPENFLFVNEDEESPLKAIDFGLSAFFKPGDIFNDVVGSPYYVAPEVLRKRYGPESDVWSAGVIIFILLCGVPPFWAETEQAIFKEVLHGNLDFTSDPWPNISEGAKDLVRKMLVRDPTKRLTAHEVLCHPWIQDDEAAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAKNLSEEEIAGLKEMFKMIDTDNSGQITYEELKDGLKRFGANIEESEIHHLMLAADVDNSGSIDYAEFIAATLHVNKVEREDNLVAAFAYFDKDGSGYITKDELQQACEEFGMEDVEEMMREADQDNDGRIDYNEFVAMMQRGNADLGKRGVRRNNSVRVGYREELSVC 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2984 589 SMART serkin_6 126 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2984 589 SUPERFAMILY EF-hand 423 562 IPR011992 -
Sto13g2984 589 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 68 571 - -
Sto13g2984 589 MobiDBLite consensus disorder prediction 1 112 - -
Sto13g2984 589 Pfam EF-hand domain pair 504 561 IPR002048 GO:0005509
Sto13g2984 589 Pfam EF-hand domain pair 432 492 IPR002048 GO:0005509
Sto13g2984 589 SMART efh_1 535 563 IPR002048 GO:0005509
Sto13g2984 589 SMART efh_1 431 459 IPR002048 GO:0005509
Sto13g2984 589 SMART efh_1 503 531 IPR002048 GO:0005509
Sto13g2984 589 SMART efh_1 467 495 IPR002048 GO:0005509
Sto13g2984 589 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Sto13g2984 589 MobiDBLite consensus disorder prediction 35 55 - -
Sto13g2984 589 Gene3D Phosphorylase Kinase; domain 1 128 211 - -
Sto13g2984 589 ProSitePatterns EF-hand calcium-binding domain. 544 556 IPR018247 -
Sto13g2984 589 ProSiteProfiles EF-hand calcium-binding domain profile. 535 566 IPR002048 GO:0005509
Sto13g2984 589 CDD STKc_CAMK 125 383 - -
Sto13g2984 589 MobiDBLite consensus disorder prediction 59 98 - -
Sto13g2984 589 CDD EFh 504 561 IPR002048 GO:0005509
Sto13g2984 589 ProSiteProfiles EF-hand calcium-binding domain profile. 499 534 IPR002048 GO:0005509
Sto13g2984 589 ProSiteProfiles Protein kinase domain profile. 126 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2984 589 Pfam Protein kinase domain 126 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2984 589 ProSitePatterns EF-hand calcium-binding domain. 512 524 IPR018247 -
Sto13g2984 589 ProSitePatterns Protein kinases ATP-binding region signature. 132 159 IPR017441 GO:0005524
Sto13g2984 589 Gene3D Transferase(Phosphotransferase) domain 1 212 391 - -
Sto13g2984 589 Gene3D - 392 565 - -
Sto13g2984 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 68 571 - -
Sto13g2984 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Sto13g2984 589 ProSiteProfiles EF-hand calcium-binding domain profile. 463 498 IPR002048 GO:0005509
Sto13g2984 589 ProSitePatterns EF-hand calcium-binding domain. 476 488 IPR018247 -
Sto13g2984 589 ProSitePatterns EF-hand calcium-binding domain. 440 452 IPR018247 -
Sto13g2984 589 SUPERFAMILY Protein kinase-like (PK-like) 125 394 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2984 Sto-Chr13 34697795 34701548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2984 54 583 EF-hand Containing Proteins AT3G10660 73.048 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto13g2984 Pkinase 5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2984 K13412 - gmx:100800415 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2984 13 34697795 34701548 Sto8g1161 8 7360555 7363059 CCT