Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto13g2964 | ATGGAAATCATTCACTTGCTAACCGATCAGAACCCCATTCAAGTTATTGTTGATGCTGTGATTAACAGTGGTCCTCGTGAAGATGCAACTCGAATTGGGTCTGCTGGAGTTGTCAGAAGACAGGCTGTTGATATCTCACCCCTTCGCCGTGTTAATCAGGCCATCTATCTTCTAACAACTGGTGCACGTGAAGCTGCTTTCAGAAATATCAAGACAATTGCTGAATGCTTGGCTGATGAACTTATCAACGCAGCTAAGGGATCATCCAACAGCTATGCTATCAAGAAAAAGGATGAGATTGAGAGAGTTGCAAAGGCAAATCGTTAA | 327 | 0.4312 | MEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR | 108 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto13g2964 | 108 | Gene3D | Ribosomal protein S7 domain | 1 | 108 | IPR036823 | - | |
| Sto13g2964 | 108 | SUPERFAMILY | Ribosomal protein S7 | 1 | 108 | IPR036823 | - | |
| Sto13g2964 | 108 | PIRSF | RPS7p_RPS7a_RPS5e_RPS7o | 1 | 108 | IPR000235 | GO:0006412 | |
| Sto13g2964 | 108 | PANTHER | 40S RIBOSOMAL PROTEIN S5 | 1 | 108 | - | - | |
| Sto13g2964 | 108 | PANTHER | RIBOSOMAL PROTEIN S7 | 1 | 108 | IPR000235 | GO:0006412 | |
| Sto13g2964 | 108 | Pfam | Ribosomal protein S7p/S5e | 1 | 108 | IPR023798 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto13g2964 | Sto-Chr13 | 34584291 | 34586975 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto13g2964 | 1 | 108 | Cytoplasmic Ribosomal Protein Gene Family | AT2G37270 | 94.444 | 1.64e-71 | 210 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto13g2964 | K02989 | - | rcu:8285751 | 207.223 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Sto13g2964 | 13 | 34584291 | 34586975 | Sto13g2964 | 13 | 34584291 | 34586975 | ECH |