Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2952 ATGGGTGTAAATTCCCTGCCATCGGAGTCAAGCAACGATCTCGATGAGCAGATCTCACAGCTCATGCAGTGCAAGCCACTTTCAGAGCAACAGGTTAAAGTTTTATGTGAGAAAGCAAAGGAGATTTTGATGGATGAAAGTAATGTCCAGCCTGTGAAAAGCCCTGTGACAATTTGTGGTGATATTCATGGACAATTTCATGATCTTGCTGAATTATTTCGAATTGGAGGGAAGTGTCCAGATACAAACTACTTGTTTATGGGAGATTACGTGGATCGGGGTTATTATTCAGTTGAAACTGTAACAGTTCTCAACTTGTGGATTTTCAGCAGAGGTAATTGGCAAGATCTTTTGAACAGTAGTGGAGGGTTTTTGGTTGCCAAGCAGAGCAGCATCTGA 399 0.4185 MGVNSLPSESSNDLDEQISQLMQCKPLSEQQVKVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTVLNLWIFSRGNWQDLLNSSGGFLVAKQSSI 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2952 132 SMART pp2a_7 27 132 IPR006186 GO:0016787
Sto13g2952 132 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Sto13g2952 132 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Sto13g2952 132 Pfam Calcineurin-like phosphoesterase 55 104 IPR004843 GO:0016787
Sto13g2952 132 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-4 CATALYTIC SUBUNIT 1 104 - -
Sto13g2952 132 SUPERFAMILY Metallo-dependent phosphatases 11 114 IPR029052 -
Sto13g2952 132 Gene3D - 3 124 IPR029052 -
Sto13g2952 132 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2952 Sto-Chr13 34486592 34488955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2952 19 107 Calmodulin-binding Proteins AT5G63870 41.053 8.43e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2952 K04382 - jre:109018985 204.527