Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2945 atggaCAAGTCCACAGAAACCCACGACTTCATGAACGTGGATTCTTTCTCTCAGCTTCCTTTCATCCGCCCTCCTCCTcctaaagaaaaggaaaagccCATCAAGCTGTTCGGTATAGAATTCGCCAGCTCCCCCCACGACCTCCATTCCTCCTCCGAAGACAACTCAAGCACCAAGGACACCGGCTCCAACGGGGAGAGCAACCGCAGATTCGAATGCCATTACTGCTGCAGAAACTTCCCTACCTCCCAAGCCTTAGGTGGCCACCAAAACGCCCACAAGCGAGAGCGCCAGCACGCCAAACGCGCCCACCTCCACACCGCCCTCTCCGACGCCCACGTCTACGGCCTCCTCAACTACACAATGCCCAATAATTATCCACCTACTACTACTGCTCCTCCCAGGTTTTACGGAAGCCCATATTCCCACCTTCACCAGCAGCCCATCAACGGAAGCCCATTGGCCTTGTGGCGGATCCCCGCCGTCCAACCTAATCACGCTACTTTCAATCGTGACCGCTCCTTGCATCATCCACTGCCCTTGTTTGCTGGCGACGATGTCAACGCCAGGGCTGCCTCTTCGGCTTCACACTTACAAAACCGCTACGTCGTCTATGATTCCAAACCAACCGTCCAAGACCATCTAAGATATAAGGTGGAACCTCCTCCTATGAGACCTAAGGCTATAGGGAGACAAAGTCTAGGCCAGTGA 711 0.5288 MDKSTETHDFMNVDSFSQLPFIRPPPPKEKEKPIKLFGIEFASSPHDLHSSSEDNSSTKDTGSNGESNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLHTALSDAHVYGLLNYTMPNNYPPTTTAPPRFYGSPYSHLHQQPINGSPLALWRIPAVQPNHATFNRDRSLHHPLPLFAGDDVNARAASSASHLQNRYVVYDSKPTVQDHLRYKVEPPPMRPKAIGRQSLGQ 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2945 236 MobiDBLite consensus disorder prediction 1 67 - -
Sto13g2945 236 MobiDBLite consensus disorder prediction 45 64 - -
Sto13g2945 236 PANTHER ZINC FINGER PROTEIN GIS 1 216 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Sto13g2945 236 SUPERFAMILY beta-beta-alpha zinc fingers 68 99 IPR036236 -
Sto13g2945 236 Pfam C2H2-type zinc finger 70 95 - -
Sto13g2945 236 ProSiteProfiles Zinc finger C2H2 type domain profile. 71 98 IPR013087 -
Sto13g2945 236 ProSitePatterns Zinc finger C2H2 type domain signature. 73 93 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2945 Sto-Chr13 34452466 34454143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2945 1 160 C2H2 Transcription Factor Family AT2G41940 44.608 9.48e-42 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2945 - - vvi:100267595 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1207 8 7621568 7625956 Sto13g2945 13 34452466 34454143 CCT
Sto13g2945 13 34452466 34454143 Sto13g2945 13 34452466 34454143 ECH