Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2925 ATGgctgaagaaagagaatccgcTAACGCAACTCTTCCACAGCGGAAGACGATTTCACCGTACGACATCACCTCGCTTGACAATCCCGGACTATCGATTACTCAAGTACAATTTAAGGGCGATAACTACGCTGAATGGGCACGCGATGTGAAGACAGCTTTGAGGGCTCGAAAGAAGTTTGGTTTCATCGATGGAACCATCCCTCGACCAAACCAGAAATCGGAAGACTTCGACGACTGGTGCACGATTAATTTACTTTTGGTTTCATGGATTAGAAACACTATAGAACCTGGGTTGCGTTCTACAATATCTCATCGCGAAGTAGCACGTGATTTGTGGAATGATATCAAGGATCGTTTTTCAGTCACGGATGGTCCTAGAATACAGCAGCTGCGTTCGAATCTTGCAGATTGCAAACAGCGCGGAATGAGCATCGTTGATTACTATGGACGTCTCAAGCAACTATGGGATGAGTTGTCTGACTATGATACCATTCCGACATGTGAGTGCGGCAAATGTAGCTGTGATCTCACGACGACGCTCGCGAAGAGACGAGAAGATGAAAGAGTTCACACGTTTCTCTTGGGCTTGGATGAATACTTATACAGTACAGTACGGTCATCCATCCTAGCTCAAGAGTCGTTGCCTAGTGTATACAAAGTATACTCCATTTTGGTGCAAGAAGAACGTGTTAAAAACATCACTCGAACGAAGGAGGATCGAGTTGAAGTCATGGCCCTCGCTGCGCGAGTGCACTCTGACGCTCGTGATAAGTCTATCGTGTGCTCTCATTGCAAGAAAACAGAGCTCGAGGCGATGGGAGAGCCGCACGAGGAAGAGGACAACCAAATAACAGGGGTGGAGGCCGAGGATATACTAGAAAAAAGGGGGGGTGTTGTTCCTCAAGACACTGAAACGCAACTCATTGTGTCTCCTAATCCTAATAACACTAATGATGTTTTGAACCCCATTGAAGAACAATTGGGACGTGGGCAACGACGAAAAGAAGCCTCTGTTAGACTTCGGGACTATGTAACTCATACCATTCAAGTAAAGAGTCCATCTCCATCACCCGCACCACAGCTTGCCTCAGATGAAGGTGGGAACATAACAGAAAGCGAGAAAAGTGCAGCCCCCAACATCAATTCCACTCGAGGATTCGATGTTGTGGACAACATCAAGACCTCGCTTGAAATTTCATGCCCTTCTGTCGTATCCTGTGCTGATATTCTTGCCCTTGCAGCCCAAGCTTCTGTGTCTTTGGGATTTGGTCGTGCCCAATGTCGAACCTTCAGCAATAGATTGTTCAACTTGAGTGGAAGTGGGAGCCCTGATCCAACTCTGAACTCCACCTATTTGGCTACTCTGCACCAAAATTGCCCTCAAAATGGGAATGGGGCTACACTCAACAATCTTGATCCTTCCTCTCCTGACACTTTTGACAACAACTACTTCACTAACCTTTTAACCAATCAGGGGCTTCTGCAATCAGATCAAGAGTTGTTTTCAACCAATGCTTCTAATACAGTCTCCATTGTTAACAATTTTGCCACCAACCAAACGGCTTTCTTCCAGGCCTTTGCTCAGTCAATGATAAATATGGCTAATATTAGACCTTTAACAGGAACCCAAGGACAAATCAGAATCGATTGCAAGAAAGTTAATGGAAGCTAG 1674 0.4504 MAEERESANATLPQRKTISPYDITSLDNPGLSITQVQFKGDNYAEWARDVKTALRARKKFGFIDGTIPRPNQKSEDFDDWCTINLLLVSWIRNTIEPGLRSTISHREVARDLWNDIKDRFSVTDGPRIQQLRSNLADCKQRGMSIVDYYGRLKQLWDELSDYDTIPTCECGKCSCDLTTTLAKRREDERVHTFLLGLDEYLYSTVRSSILAQESLPSVYKVYSILVQEERVKNITRTKEDRVEVMALAARVHSDARDKSIVCSHCKKTELEAMGEPHEEEDNQITGVEAEDILEKRGGVVPQDTETQLIVSPNPNNTNDVLNPIEEQLGRGQRRKEASVRLRDYVTHTIQVKSPSPSPAPQLASDEGGNITESEKSAAPNINSTRGFDVVDNIKTSLEISCPSVVSCADILALAAQASVSLGFGRAQCRTFSNRLFNLSGSGSPDPTLNSTYLATLHQNCPQNGNGATLNNLDPSSPDTFDNNYFTNLLTNQGLLQSDQELFSTNASNTVSIVNNFATNQTAFFQAFAQSMINMANIRPLTGTQGQIRIDCKKVNGS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2925 557 ProSiteProfiles Plant heme peroxidase family profile. 362 555 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g2925 557 Pfam gag-polypeptide of LTR copia-type 26 71 IPR029472 -
Sto13g2925 557 MobiDBLite consensus disorder prediction 350 379 - -
Sto13g2925 557 SUPERFAMILY Heme-dependent peroxidases 370 555 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sto13g2925 557 Pfam Peroxidase 371 420 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g2925 557 Pfam Peroxidase 423 518 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g2925 557 PRINTS Haem peroxidase superfamily signature 405 422 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g2925 557 PRINTS Haem peroxidase superfamily signature 473 488 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g2925 557 PANTHER PEROXIDASE 423 556 - -
Sto13g2925 557 PANTHER PEROXIDASE 364 422 - -
Sto13g2925 557 PANTHER PEROXIDASE 72-RELATED 364 422 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2925 557 PANTHER PEROXIDASE 72-RELATED 423 556 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2925 557 Pfam Retrotransposon gag protein 101 198 IPR005162 -
Sto13g2925 557 Gene3D Peroxidase, domain 2 403 534 - -
Sto13g2925 557 PRINTS Plant peroxidase signature 385 398 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2925 557 PRINTS Plant peroxidase signature 404 414 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2925 Sto-Chr13 34341225 34348130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2925 314 557 Peroxidase AT5G06720 47.682 1.84e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2925 - - cpap:110806350 341.273