Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2916 ATGTTTTCGTGGTTGGCAAGGATAGTTTCTGCGTGCTTGAGGCCGGTCAGGCGGTATGCCCGCATGAACAAGGATGACGTGGATGATCCATCCCCTATCGAAGACGCTCTACTCTGGTTCAAGGACCTCGAGAAGCACTCCTGCGGCGAATTCTCTTTTGCTGTGGTTCAAGCCAATGAAGTTATTGAGGATCACAGCCAGGTCGAGACCGGCTCCGACGCCATGTTCGTCGGAGTTTACGACGGCCACGGTGGGCCCGAAGCGTCCCGGTTTATCAGCGAACACCTCTTCCATCATCTAATGAGGATTGCTCGAGATAATGGTGCTATATCGGAAGATATCCTCAGGGGTGCTGTTTCTGCTACTGAGGATGGTTTTCTGACTTTTGTTCGAAGGAGTTATGGTATAAAGCCACTGATAGCAGCAATGGGTTCCTGTTGTCTGGTTGGTGTTATTTGGAAAGGGACATTATATGTCGCCAATCTTGGAGACTCTCGTGCTGTAATTGGTTCTACAGATGGATCTAACAAGATTGTTGCTGAGCAGTTGACCAGAGAGCACAATGCTAGCAAAGAGGAGGTTAGACGGGAACTCAGGTCCTTGCATCCAGAAGATTCACAAATTGTAGTAATGAAGCATGGAACATGGCGCATTAAAGGAATCATCCAGGTATCCAGATCTATAGGTGATGCATATTTGAAGAGACCAGAGTTTTCTCTTGATCCTTCATTCCCTCGGTTCCACCTGCCTGAACCTATTCGCCGGCCTGTGCTGACAGCAGAACCATCGATAAGTACAAGGGTCTTACAACCTAATGATAAATTCCTTATATTTGCATCTGATGGACTTTGGGAACACCTTACAAATCAGGAAGCTGCAGAGATTGTGCATAACAACCCACGAACTGGGATCGCAAGAAGACTACTTAAAGCGGCTCTAAATGAGGCAGCTAGGAAAAGGGAAATGAGATATAAAGATCTTCAGAAGGTTGAGAAGGGGATCAGGAGGTTCTTTCACGATGATATAACAGTTGTGGTTGTGTTCATAGATCATGAGTTGGCTGGGAAGGAGATTACTGTACCAGAATTGTCCATCAGAGGTTTCGCTGACACGGTGGGTCCATCTCATTTCAAATTTGTGCGGGAATGA 1149 0.4674 MFSWLARIVSACLRPVRRYARMNKDDVDDPSPIEDALLWFKDLEKHSCGEFSFAVVQANEVIEDHSQVETGSDAMFVGVYDGHGGPEASRFISEHLFHHLMRIARDNGAISEDILRGAVSATEDGFLTFVRRSYGIKPLIAAMGSCCLVGVIWKGTLYVANLGDSRAVIGSTDGSNKIVAEQLTREHNASKEEVRRELRSLHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSISTRVLQPNDKFLIFASDGLWEHLTNQEAAEIVHNNPRTGIARRLLKAALNEAARKREMRYKDLQKVEKGIRRFFHDDITVVVVFIDHELAGKEITVPELSIRGFADTVGPSHFKFVRE 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2916 382 Pfam Protein phosphatase 2C 65 318 IPR001932 -
Sto13g2916 382 SUPERFAMILY PP2C-like 55 350 IPR036457 -
Sto13g2916 382 Coils Coil 180 200 - -
Sto13g2916 382 PANTHER ALPHABET, ISOFORM E-RELATED 6 369 - -
Sto13g2916 382 SMART PP2C_4 44 347 IPR001932 -
Sto13g2916 382 ProSiteProfiles PPM-type phosphatase domain profile. 50 349 IPR001932 -
Sto13g2916 382 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 369 - -
Sto13g2916 382 Gene3D - 34 357 IPR036457 -
Sto13g2916 382 CDD PP2Cc 51 349 IPR001932 -
Sto13g2916 382 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2916 Sto-Chr13 34303949 34306617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2916 1 377 PP2C-type Phosphatase Gene Family AT5G06750 71.392 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2916 K01102 - gmx:100778238 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1233 8 7778939 7783068 Sto13g2916 13 34303949 34306617 CCT
Sto13g2916 13 34303949 34306617 Sto13g2916 13 34303949 34306617 ECH