LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto13g2915	ATGGAGCTCAGAGATTTCAATGATCATCAATCCAGCCACGAGCCGGGAGTGGAAGTACTAACGAAGCAAGAGGAAGatgaagtgtttgaaattcagaaAGAAACGTATAGGGGGCAGCAATACAGCCAGATTTACTTTGCCCGTCTTCACTTGATGAGAACTCTCCTTTTGGAAGTCATTTACGAGTTTAAGTTTGCTGCAGTTTGCACAGTGTTGGAACTGGAAGAGGGCAAGGAATGTGTCATTGTTGGAACCCTCTATAAACACATGAAGCTCAAACCTTGCATACTTGATGAGTATTCTAAGGAGAGATCTGCAATGCCACTCGTCAAGCCTCATAACTTCATGCATCCAGATGATCATCTAGTTTTGGAAGATGAAAGTGGGAGAGTTAAGCTCAGTGGTCTTCTTTTACCTTCTGTATATATAACAGGAATTGTAGTTGCCATACAAGGAAAGGAAACTGGGGCAGGTGATTTTTTGGTTCAAGATGTCCTGGAAGCTGGCCTACCACCTCAGATAGAACTTCCTCTTAAATCAAAGGAAGACAAATATGTTGTTCTTGTATCGGGGTTAAGCATTGGGAGCAGTAACTCTAATCCTCTCCAATTTCAGCTTCTCATTGATCATATTACTGGACATTTAGGAGATGAGAAGGAGCAAAATATTGCGTCTCAAATTGTTCACGTTGTCATTGCTGGAAATTCTGTTGAGTTCCCTCGTGGACTTCTTAATGGGCAGAATTTGGCTGCAAAGGATCTCTCAAGGTTGTCTGAACCAATAAAGGAACTGGATATCCTGTTGAATCAGaTTACTGCAGGTTTGCCTTTGGATATCATGCCAGGACCCAGTGACCCGGCTAACTTCTCATTACCACAGCAGCCTTTGCATAGGTGCCTTTTCCCTGGGTCATCAACTTATAACACTTTTAGATCTTGTACAAATCCTCACTGCTTTGAGCTTGATAATATcagATTTCTTGGAACATCAGGTCAAAATGTAGATGATCTTGAGAAGTACTCAGAGGCAAAAGATAAACTTGAATTCATGGAAAGGACCTTAAAGTGGAGGCATTTGGCACCAACAGCACCTAATACCCTTGGGTGCTATCCTTATACTGATAAGGATCCTTTCTTCCTTGAGAGCTGTCCTCATGTATATTTCGTTGGCAATCAGGATAAATATGAAACTCGTGTGATAAAAGGATCAGAAGGGCAGTTGGTGAGACTCATTTGCGTTCCTAAATTCAATGAGACTGGAGTTGCTGTTATGttaAATTTGAGGAATCTTGAATCTCACGCTCTTAGTTTTGGAACTCAATTCAGCACTTAA	1332	0.4077	MELRDFNDHQSSHEPGVEVLTKQEEDEVFEIQKETYRGQQYSQIYFARLHLMRTLLLEVIYEFKFAAVCTVLELEEGKECVIVGTLYKHMKLKPCILDEYSKERSAMPLVKPHNFMHPDDHLVLEDESGRVKLSGLLLPSVYITGIVVAIQGKETGAGDFLVQDVLEAGLPPQIELPLKSKEDKYVVLVSGLSIGSSNSNPLQFQLLIDHITGHLGDEKEQNIASQIVHVVIAGNSVEFPRGLLNGQNLAAKDLSRLSEPIKELDILLNQITAGLPLDIMPGPSDPANFSLPQQPLHRCLFPGSSTYNTFRSCTNPHCFELDNIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLKWRHLAPTAPNTLGCYPYTDKDPFFLESCPHVYFVGNQDKYETRVIKGSEGQLVRLICVPKFNETGVAVMLNLRNLESHALSFGTQFST	443

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto13g2915	443	Pfam	DNA polymerase delta subunit OB-fold domain	40	165	IPR040663	-
	Sto13g2915	443	PANTHER	DNA POLYMERASE DELTA SUBUNIT 2	19	437	IPR024826	-
	Sto13g2915	443	Pfam	DNA polymerase alpha/epsilon subunit B	186	395	IPR007185	GO:0003677\|GO:0006260
	Sto13g2915	443	Gene3D	-	177	442	-	-
	Sto13g2915	443	CDD	MPP_PolD2_C	185	437	IPR041863	-
	Sto13g2915	443	Gene3D	-	46	168	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto13g2915	26	442	Core DNA Replication Machinery Family	AT2G42120	76.850	0.0	686

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto13g2915	K02328		-	gmx:100780072	737.643

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto13g2915	13	34290540	34299588	Sto13g2915	13	34290540	34299588	ECH