Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2906 ATGTATGCTTGTTGGGAGATGTACGACACAGCGTGGGATGTATGGAAGATTGGAGGATCAGATTCAGAAGTAGAGCAAAGTTTTGAGGGCATTAAATCAGCTAATTTCAACATTGTGTCTCCCCTGCAAACATCATCACCTGATTCCTTGTGTGGAAGCACCAGGTTTCACCATCATCAGATTAACAATACCAAACAATTAGATCCACCAAACTCTCAATTCAGTTTCACTAACTCCTTGCATTCAATTGTTGAATCTTTCCTGTCTACCACCCAACGAactttttcttctaattctgAAACATATAGTGCGTTTCCTTCTCATCATAATTCTCACAAAGTGCCTTTATCATATGACAACTTCCCAAAAGAAAACGACTTGCTGGCTAGTGGTGATATTGGTGCTAAAGAtataatgaagaagaagaagccccCTGAAATTTGCTTTCAGAGAAATCAGCTAGATGAGCAGCGTGGGATTGCGTCTTTAAAGCGTAAAAGAAGAATAAGATGGACCAAAGATCTCCATGATCCTTTCATTATGATTGTTAATCGCCTTGGTGGTCCTCAAAAGGCAACGCCTAAGTCTATACTAGAAATGATGGACTCCGATGTACTCACCATTTCTCACGTTAAGAGTCATTTGCAGAAATATCGATCTACAATACACATGCGCAAATCCTTGCAAGAAATATCTAAAGAAGGGAATAGACCAGATGGGGTGTGTGATCTTCAACTCAAAATCAACGAGCAAATTGAGGAATCAAGGAAGCTGCAATTTGAAGTTCAAAAGAGTCTTCATGAACAACTAAAGATGCAACAACATTTGCAACTACTAATAAAACAGCAGAGGAAGCAGCTCAAGATAATGTTAGAACTCCAAAGGCAAAAAAGCAAAGAGAAAGTGTGCGTCCCGTCTAGTTCTTTCCCTTGCTCATAA 939 0.3791 MYACWEMYDTAWDVWKIGGSDSEVEQSFEGIKSANFNIVSPLQTSSPDSLCGSTRFHHHQINNTKQLDPPNSQFSFTNSLHSIVESFLSTTQRTFSSNSETYSAFPSHHNSHKVPLSYDNFPKENDLLASGDIGAKDIMKKKKPPEICFQRNQLDEQRGIASLKRKRRIRWTKDLHDPFIMIVNRLGGPQKATPKSILEMMDSDVLTISHVKSHLQKYRSTIHMRKSLQEISKEGNRPDGVCDLQLKINEQIEESRKLQFEVQKSLHEQLKMQQHLQLLIKQQRKQLKIMLELQRQKSKEKVCVPSSSFPCS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2906 312 Gene3D - 165 222 - -
Sto13g2906 312 Pfam MYB-CC type transfactor, LHEQLE motif 251 296 IPR025756 -
Sto13g2906 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 63 301 IPR044848 GO:0003700
Sto13g2906 312 SUPERFAMILY Homeodomain-like 164 221 IPR009057 -
Sto13g2906 312 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 166 220 IPR006447 GO:0003677
Sto13g2906 312 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 63 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2906 Sto-Chr13 34211378 34213777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2906 161 310 G2-like Transcription Factor Family AT3G04450 40.881 5.37e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto13g2906 Myb_CC_LHEQLE 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2906 - - gmx:102668008 192.586