Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2905 ATGATCAACTTGCGAAAGCTTAGATTAACATCCATTCTCCAACGGACTCCTTCCGATTTTACTCAAAATCTTCTTAGGTCATCGGAAAACCCACTTCGGCTTGTTGGACTCATCTGCATTGCTCAAAACCCTAGATTGTGCGGAACAACAAGAGCAGTTCAATTTGTGCCTTGTAAAGACCTTGAAGCGGCTTTAAATGCCGTCGGTCGCACCATTCGGGAGGCCCGAAAAGCAGCTAAATCTGCATTACTGGATTATCTGCATTATACTAGAAGCTTCCAGTACTTGGATGCAGATAATATAAGTAAGAACTCACCTTATTTTGTTGATGAGCTTCTGAAGAAAGTCAAAATGGAGGAGGACATCAAGCGATCAGTTTCCCGGTACTTGCGCTACCATCCTATCAATGAATTTGAACCCTTCTTCGAAAGCATAGGTTTGAAACCTTCTGAATATGTGTCTTTTCTACCGAAtaatatgattttcttaagtGATGACCAACTGTTGCTAGAGAACTATTATGTTTTGTGTAACTATGGGGTTCCACGTAATAAGATAGGAAAGATTTACAGGGAAGCACCTGAAGTGTTTGGCTACGATAATAGGGTTTTACTATCAAAGCTTATAGCTTATGAAAAACAAGGTGTTTGCCAGACTACTCTACTGAAAGTTATTGTTTCTAACCCACACCTCTTGATTGGGGATAGTAACCTTTATTTTATAGAGGTTATAGAGAAGCTGAAGTACTATGTGAATGATATTAATTGGATTGAGGAGCATTTGTTGGATGAGATTTCTTATAATTGGGGCCAGATGCTTGAGTTCTTATGCTTGCTTGGCAAGGCTTTCAGCGAGCAACAGTTGGCTGACGTAATCCACCAGCATCCTGTCCTTTTTGAGGAGTCAGGAGGTCGAACACTCTCCCTTATTAGCTTCTTGTTAAAATTTGGATTGTCCATGAATCTGATATCGCAAATATTTCTGAAGTTTCCACAAATTCAAGTGGGCATTTTCCTCTCCAATTTGAGGCATTGTTTTCTATTCCTAAGTGAAATTGAAATGGAGGGTGCAGAAATTGGGAAGATTTTCCGCTCTCATGCCTTGTTATTGGGTTCATTCACATTGAAGAGAACAAATAGTCTACTTGCTAGCTTGAAAGTAGGCAAGAAGCGAGTTAAGATGCTTGTAAGGGATAATCCGCTAGAATTGAAGAATTGGGTTCTGAGAAGAAGAGTTCATCCTTTGCTAGACACAGAGGAAGAGCAAAATTCTCGGATGCAGAAGACAAAGTTCTTGTTGAAGTTGGGATATGACGAGGACTCGCCTGAAATAAAAAAAGCATTTAAGGTGATCAGAGGTAAGGGAGCAGAACTCCAAGAAAGGTTTGATTGTATTGTTAAAGCTGGCTTGGATTTTCAGGATGTGCTGCATATGATTAGTGTTTCCCCTCAGATTCTTAACCTCACTACAGATGTAATCAACTTGAAAATTGACTATCTAGTAAATGAACTAGGATATCCCGTATCAACTTTGGTGAACTTCCCATCTTTTCTTTCCTACAAAGTTGAAAGAGTCAATCTTAGGCATTCAATGTATGATTGGCTCGTAGACCAGGGAACTGCAGTTCCCAACCTTTCTTTGAGCACTATAGTTGCATGCACAGAGAAAGAATTCCTACGAGTGTATGCGATTGAAGATTTGGCTGCTTATTTAGAGCCTAAtggttttcttctctttcccaGTACGCTAGTTGATAAGTCATCAGCTCTGAACCTTGTAGAAGGTTTATGCTATGGATTATGGAACAACAGATATAAATGTCCACTGCATAATTGTGAAATACACTTCAGGGCACTTAGAATTTAG 1866 0.3896 MINLRKLRLTSILQRTPSDFTQNLLRSSENPLRLVGLICIAQNPRLCGTTRAVQFVPCKDLEAALNAVGRTIREARKAAKSALLDYLHYTRSFQYLDADNISKNSPYFVDELLKKVKMEEDIKRSVSRYLRYHPINEFEPFFESIGLKPSEYVSFLPNNMIFLSDDQLLLENYYVLCNYGVPRNKIGKIYREAPEVFGYDNRVLLSKLIAYEKQGVCQTTLLKVIVSNPHLLIGDSNLYFIEVIEKLKYYVNDINWIEEHLLDEISYNWGQMLEFLCLLGKAFSEQQLADVIHQHPVLFEESGGRTLSLISFLLKFGLSMNLISQIFLKFPQIQVGIFLSNLRHCFLFLSEIEMEGAEIGKIFRSHALLLGSFTLKRTNSLLASLKVGKKRVKMLVRDNPLELKNWVLRRRVHPLLDTEEEQNSRMQKTKFLLKLGYDEDSPEIKKAFKVIRGKGAELQERFDCIVKAGLDFQDVLHMISVSPQILNLTTDVINLKIDYLVNELGYPVSTLVNFPSFLSYKVERVNLRHSMYDWLVDQGTAVPNLSLSTIVACTEKEFLRVYAIEDLAAYLEPNGFLLFPSTLVDKSSALNLVEGLCYGLWNNRYKCPLHNCEIHFRALRI 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2905 621 Coils Coil 58 78 - -
Sto13g2905 621 PANTHER MITOCHODRIAL TRANSCRIPTION TERMINATION FACTOR-RELATED 6 563 - -
Sto13g2905 621 Pfam mTERF 282 439 IPR003690 GO:0003690|GO:0006355
Sto13g2905 621 Pfam mTERF 424 559 IPR003690 GO:0003690|GO:0006355
Sto13g2905 621 SMART mt_12 187 217 IPR003690 GO:0003690|GO:0006355
Sto13g2905 621 SMART mt_12 508 541 IPR003690 GO:0003690|GO:0006355
Sto13g2905 621 SMART mt_12 289 319 IPR003690 GO:0003690|GO:0006355
Sto13g2905 621 SMART mt_12 324 355 IPR003690 GO:0003690|GO:0006355
Sto13g2905 621 SMART mt_12 476 507 IPR003690 GO:0003690|GO:0006355
Sto13g2905 621 PANTHER CGI-12 PROTEIN-RELATED 6 563 IPR003690 GO:0003690|GO:0006355
Sto13g2905 621 Gene3D Transcription termination factor 3, mitochondrial 113 265 IPR038538 -
Sto13g2905 621 Gene3D Transcription termination factor 3, mitochondrial 308 572 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto13g2905 mTERF 3.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2905 - - qlo:115952342 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2905 13 34202325 34204710 Sto13g2905 13 34202325 34204710 ECH