Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2899 ATGCAGAGGCCTCCACCAGATGACTTTTTGTTGAAGGAGACCAACCCTCACCTTGGTGGGGGAAAGGTCTCTGGCGATAAACTTACAAGCACCTATGATCTCGTTGAGCAGATGCAGTACCTCTATGTAAGGGTTGTCAAGGCTAAGGACTTACCTGGAAAGGATGTAACTGGCAGTTGTGACCCTTATTGTGAAGTCAAGCTTGGAAACTACAAAGGTACCACTCGGCACTTTGAGAAGAAAAGTAATCCCGAATGGAACCAGGTTTTTGCTTTCTCTAAAGATCGCATTCAGGCTTCAGTGCTGGAGGTTACTGTCAAAGATAAGGATGTTGTGAAGGATGACTTCATTGGGCGGGTCTTGTTTGATCTGAACGAGGTCCCAAAACGGGTTCCCCCAGATAGCCCTCTAGCGCCACAATGGTATAGATTGGAGGATAGGAAGGGTGACAAGGCAAAGGGAGAGCTAATGCTGGCTGTTTGGATGGGTACACAAGCTGATGAAGCATTTCCTGAAGCTTGGCACTCAGATGCTGCAACGGTTAGTGGGACTGATGCTCTTGCAAACATTAGATCTAAAGTGTATCTATCACCTAAGCTTTGGTATTTAAGGGTTAATGTAATAGAGGCACAAGACTTGCAACCGACTGACAAGGGTAGATACCCAGAAGTTTTTGTGAAGGCCATCCTGGGCAATCAGGCTTTGAGGACTAGAATATCTCAGAGTAGGAGCATTAATCCAATGTGGAATGAGGATCTGATGTTCGTTGCAGCAGAACCATTTGAGGAGCCCCTGATTTTGAGTGTGGAAGACAGAGTTGCACCTAACAAAGATGAAGTATTGGGGAGGTGTGCAATTCCTTTGCAGTACATGGACAGGAGGCTAGATCATAAACCTGTGAATACTAGGTGGTTTAATCTTGAGAAACATGTTGTCATAGAAggggaaaagaagaaggaaattaAGTTTGCTAGCAGGATCCATATGAGGGTCTGTCTGGAAGGTGGTTATCATGTATTGGATGAATCAACTCACTACAGTAGTGATCTTCGTCCAACAGCGAAACAGCTATGGAAGTCCAGTATCGGAGTTCTTGAAGTGGGGATACTAAATGCCCAAGGTTTAATGCCAATGAAAACAAAAGATGGGAGGGGGACAACTGATGCTTATTGTGTGGCAAAATATGGACAGAAATGGGTAAGGACAAGGACAATCATTGATAGTTTTACACCCAAATGGAATGAGCAATATACTTGGGAAGTCTTTGATCCTTGCACTGTCATAACAATTGGTGTATTTGATAACTGTCATTTGCATGGTGGGGATAAAGCTGGAGGAGCAAAAGATTCAAGGATTGGGAAGGTAAGGATTCGTTTGTCCACCCTTGAGACTGATCGTGTCTATACACATTCTTATCCTCTTCTAGTTCTTCACCCTAATGGGGTGAAGAAGATGGGTGAAATACACTTGGCTGTGAGGTGGAGGCCAAGGCACCCTCCTCACATGGACACTCGGCTCTCCCATGCAGACTCTGCACATCCTGATGAACTGGATGAAGAATTTGACACATTCCCGACCTCTCGACCTTCTGACATTGTGAGGATGAGATATGATCGACTTAGAAGTATTGCCGGGAGGATACAGACGGTGGTTGGTGACTTGGCTACTCAGGGGGAGAGGCTGCAGTCTTTGCTCAGCTGGCGAGATCCAAGAGCGACAGCCCTGTTTGTGATTTTCTGTCTAGTTGCTGCCATTGTCCTGTATGTCACTCCTTTTCAAGTTGTGGCCCTCCTCACTGGATTTTATGTGTTGAGACATCCGAGGTTCCGTCATAAGCTTCCTTCCGTGCCGCTGAATTTCTTCAGGAGGCTGCCCGCAAGAACTGATTGCATGCTGTGA 1899 0.4539 MQRPPPDDFLLKETNPHLGGGKVSGDKLTSTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYCEVKLGNYKGTTRHFEKKSNPEWNQVFAFSKDRIQASVLEVTVKDKDVVKDDFIGRVLFDLNEVPKRVPPDSPLAPQWYRLEDRKGDKAKGELMLAVWMGTQADEAFPEAWHSDAATVSGTDALANIRSKVYLSPKLWYLRVNVIEAQDLQPTDKGRYPEVFVKAILGNQALRTRISQSRSINPMWNEDLMFVAAEPFEEPLILSVEDRVAPNKDEVLGRCAIPLQYMDRRLDHKPVNTRWFNLEKHVVIEGEKKKEIKFASRIHMRVCLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLEVGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSFTPKWNEQYTWEVFDPCTVITIGVFDNCHLHGGDKAGGAKDSRIGKVRIRLSTLETDRVYTHSYPLLVLHPNGVKKMGEIHLAVRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATALFVIFCLVAAIVLYVTPFQVVALLTGFYVLRHPRFRHKLPSVPLNFFRRLPARTDCML 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2899 632 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Sto13g2899 632 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 493 632 - -
Sto13g2899 632 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 1 493 - -
Sto13g2899 632 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 354 IPR035892 -
Sto13g2899 632 SMART C2_3c 202 300 IPR000008 -
Sto13g2899 632 SMART C2_3c 364 471 IPR000008 -
Sto13g2899 632 SMART C2_3c 40 136 IPR000008 -
Sto13g2899 632 PANTHER PROTEIN QUIRKY-LIKE 493 632 - -
Sto13g2899 632 PANTHER PROTEIN QUIRKY-LIKE 1 493 - -
Sto13g2899 632 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 503 IPR035892 -
Sto13g2899 632 Pfam C2 domain 363 474 IPR000008 -
Sto13g2899 632 Pfam C2 domain 40 142 IPR000008 -
Sto13g2899 632 Pfam C2 domain 201 307 IPR000008 -
Sto13g2899 632 MobiDBLite consensus disorder prediction 1 23 - -
Sto13g2899 632 CDD C2C_MCTP_PRT_plant 202 352 - -
Sto13g2899 632 ProSiteProfiles C2 domain profile. 346 472 IPR000008 -
Sto13g2899 632 Pfam Plant phosphoribosyltransferase C-terminal 491 632 IPR013583 -
Sto13g2899 632 Gene3D C2 domain 348 496 IPR035892 -
Sto13g2899 632 Gene3D C2 domain 188 331 IPR035892 -
Sto13g2899 632 Gene3D C2 domain 24 162 IPR035892 -
Sto13g2899 632 ProSiteProfiles C2 domain profile. 22 142 IPR000008 -
Sto13g2899 632 CDD C2B_MCTP_PRT_plant 40 164 - -
Sto13g2899 632 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 40 177 IPR035892 -
Sto13g2899 632 CDD C2D_MCTP_PRT_plant 364 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2899 Sto-Chr13 34152897 34155221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2899 17 632 Lipid Metabolism Gene Families AT3G57880 36.589 1.05e-95 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2899 - - zju:107405570 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2899 13 34152897 34155221 Sto4g2122 4 22701043 22703559 ECH
Sto13g2899 13 34152897 34155221 Sto13g2899 13 34152897 34155221 ECH