Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2868 ATGTTGCCGGTTTTGTTTGTGGCGGCCTTCGCCGCCGTGCCTTTCACCTTGTACTTCCCGCCGATCCGCAACTTCAACCTTATGACTCAGACCATTCAGCACTTCATGCGAGATGCCACTCGCTCTGCCGTTAGGCTCTATCCTTATTTAACATTCGCTTTCTCTCGTATTTTTGCTTCCCCAAGGCTCCAGTTGAGAAATATTGTGTCAAGCATGGGCAAAACATCTGAATCTGTGAAAACTCGTCCATGGCTTTGGATCATTGAAGCACTGGCAGGATTCGAGGGAATAGACATATCTACGTTACTTGATTTGATTGAGGTATTCCCTGTAGTGCACAATGACCTTGGTAAAAATACAAGGGAATTGGTTGCCATGAGATATTTGGAGGCCTTGTTTGGTTCTGTTAGTGGGGTTAACTCCCATGCTACTAGCCTGGATTCCAGAGTAGGGCCTGATTTTCCCCTTAGTTGTGAAGATGTTCTCCAAGAAATATTGCAAGAGGTACTATTGTCAGATATGAAAATATCTGGAGCCGAGCTTTTGAAACGGAACATATACCCAGCCATCATGAACAAAAGAGCTAACACTATTAAGTGTGAATTAGAGCAGCTGAAACAATCAGTCACTGAAGGTACTCATCCATGTGCTGAACGCTTAAGAGAAAGGAGTGGACTGGCACTTCAGAATCGGGATTACAAAGTGCCTGCAAGTGATGGAAAATGCAATGATCTTTCTAAGAAGGGTAATGAGAATTGCATTTATGTTGAGAGCATGGAAGCAACGGAAAATGCATCATCCTCTAAGAGAAATAGGGATTACTCAAATGATGAGCATGCTATTCAATTCCTGCATGAGAAGCAAGTTGGTGTAGAATATGATGATTTCCTAAGAAATGCTAAAAAGAATAAATGTTATGCACCTTCTGATATTGAGTCCAAGAAAGATGAGAGAGTTCATCCACATAGAAGGGATGTGTCAGAAAATTCAACTAAGAGAGTTCTTCTAACTTTTGAGAAAGGAGGACAGCATACACAAAATGATCATGTGGCAACTTTGGGAGAAGGCTCAGTCTTAAAGGATTGTCATGATAGGTGCACTACTTCAAATTGGTGCAGAAGCAATAGTCACAATGAAGTCTCTCGTGATGTTTTGGATATTCCTTTTAGTACTACTATGAGGCCTCAACATACATTTGGAGGAAAACCTTGTCAACAACAGGTTGAATCAATTACAACAAATGTTGAAATCCCAGATCAAATTCCACTTGTGATTTATGCTGGTGATGTCTCCACTACCATGATCCCTGACCATACATTGGGAGGCGAACCTTGCCAAAACACTTATTTGCATGAAACCAAAGATAATAGTGAACATCATATAGAGCCTGTTCCAACAAATATTGGTGATCTAGGTGAAATTCAACGTAAAAGTAACAAATACCAATGTGAACAGAAAATAGGTTTTCAATTGAAGCATCCCACTGCTGCAGATCCAAATAACTCTCAGAAGCTAGTTGCTAGTGATGAAACTATTGTTGTTGCAGTTAATGGCCGTGGAGGGGAGCACAGCAACAGGATtgattttgcagacaaaaaccaTGAATTCTTGAGCTCTTCGTATATTTCTAGACAAGATTTCTCAGCAAGTACTGAATGGGGAGAAGGAAATCTTTGTATGAAGTGTAAAAAAAGTGGCACTTTATTGATTTGTAAAACAACAACTTGTCAATTAATGGTTCATGAAAGTTGTCTGGGTGCTCCTGTTCGGCTTGATGCAGAGGGTAATTTTTTCTGCCCATTTTGTGCATATTCTAATGCTACATCAAAATATCTTGAAGCCAAGAAAAAGGCTTTCTTAGCAAAGGAAGACTTATGTACCTTTCTTGGTAAGACTATAGAGCATCGAGCCGGTGAACTATGTGGAGTTCGTAGAGAAGAGAATAATCTTTCAGTAAAGCCTAAGTGTGACCATGTTCATGTCAAAGAAAACGGAAATGATTGGTTACCAGGAACAAGGAGAGAAGACAACCCAGAAGATCATATTAAGCATGTAAACGAAATCAATAATCCTCCATTTGAAAGAAGTCAGCAACAAGCCGAGCCCCCTACATCATGTGATAATCTCCtcccatcttgcagagaggagGGAATTGAAAAAAATAGGATAGAAGCAAAATTTCCCTCTGTTAATCAAAATAATACTGGAAAAAAAATTCAGCTTCATGTGCCAGAACAACACAAGACTAATCAAATGGAAGGCTCGGATTTTActcatgatgatgaagaagataacATTTCTGAAGATGACCCTGGAAAACCTATCAATTCCAGCAAATCCCCACCAATCCCTCAGTTCGGCTTAAGACGAAGGAAAATTCCATGGACAGCTGAGGAGGAAGAAATACTAAGGGAGGGAGTGCATAAGTTTGGGGTAGGTAACAAAAAAATGCCATGGAAACAAATTCTTGAATTTGGTTCTAATGTGTTTTTGAAGGAACGTACAACAGGAGACCTGAAGGATAAATGGAAGAACATCTGCAaagcaaaatcaaaatcaaattga 2565 0.3871 MLPVLFVAAFAAVPFTLYFPPIRNFNLMTQTIQHFMRDATRSAVRLYPYLTFAFSRIFASPRLQLRNIVSSMGKTSESVKTRPWLWIIEALAGFEGIDISTLLDLIEVFPVVHNDLGKNTRELVAMRYLEALFGSVSGVNSHATSLDSRVGPDFPLSCEDVLQEILQEVLLSDMKISGAELLKRNIYPAIMNKRANTIKCELEQLKQSVTEGTHPCAERLRERSGLALQNRDYKVPASDGKCNDLSKKGNENCIYVESMEATENASSSKRNRDYSNDEHAIQFLHEKQVGVEYDDFLRNAKKNKCYAPSDIESKKDERVHPHRRDVSENSTKRVLLTFEKGGQHTQNDHVATLGEGSVLKDCHDRCTTSNWCRSNSHNEVSRDVLDIPFSTTMRPQHTFGGKPCQQQVESITTNVEIPDQIPLVIYAGDVSTTMIPDHTLGGEPCQNTYLHETKDNSEHHIEPVPTNIGDLGEIQRKSNKYQCEQKIGFQLKHPTAADPNNSQKLVASDETIVVAVNGRGGEHSNRIDFADKNHEFLSSSYISRQDFSASTEWGEGNLCMKCKKSGTLLICKTTTCQLMVHESCLGAPVRLDAEGNFFCPFCAYSNATSKYLEAKKKAFLAKEDLCTFLGKTIEHRAGELCGVRREENNLSVKPKCDHVHVKENGNDWLPGTRREDNPEDHIKHVNEINNPPFERSQQQAEPPTSCDNLLPSCREEGIEKNRIEAKFPSVNQNNTGKKIQLHVPEQHKTNQMEGSDFTHDDEEDNISEDDPGKPINSSKSPPIPQFGLRRRKIPWTAEEEEILREGVHKFGVGNKKMPWKQILEFGSNVFLKERTTGDLKDKWKNICKAKSKSN 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2868 854 MobiDBLite consensus disorder prediction 726 751 - -
Sto13g2868 854 ProSiteProfiles Myb-like domain profile. 787 847 IPR001005 -
Sto13g2868 854 MobiDBLite consensus disorder prediction 692 711 - -
Sto13g2868 854 MobiDBLite consensus disorder prediction 692 706 - -
Sto13g2868 854 CDD SANT_TRF 793 848 - -
Sto13g2868 854 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 553 615 IPR013083 -
Sto13g2868 854 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 68 849 - -
Sto13g2868 854 SMART sant 791 849 IPR001005 -
Sto13g2868 854 MobiDBLite consensus disorder prediction 724 789 - -
Sto13g2868 854 Pfam Myb-like DNA-binding domain 794 845 IPR001005 -
Sto13g2868 854 ProSiteProfiles Zinc finger PHD-type profile. 556 605 IPR019787 -
Sto13g2868 854 Gene3D - 788 850 - -
Sto13g2868 854 SMART PHD_3 558 603 IPR001965 -
Sto13g2868 854 ProSitePatterns Zinc finger PHD-type signature. 559 602 IPR019786 -
Sto13g2868 854 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 789 851 IPR017930 -
Sto13g2868 854 SUPERFAMILY FYVE/PHD zinc finger 549 607 IPR011011 -
Sto13g2868 854 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 68 849 - -
Sto13g2868 854 SUPERFAMILY Homeodomain-like 789 848 IPR009057 -
Sto13g2868 854 MobiDBLite consensus disorder prediction 663 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2868 Sto-Chr13 33950874 33957529 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2868 791 846 Single Myb Histone (SMH) Gene Family AT1G72740 45.763 2.18e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto13g2868 Myb_DNA-binding 2.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2868 - - cam:101508857 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2868 13 33950874 33957529 Sto13g2868 13 33950874 33957529 ECH