Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2852 ATGGAAATCCTGTACTTGTTGTATCTTGTGCTTGCTTGGTATGTCTCAAAATCTGAGCTTGTGGGTGCTGAGTCACAGGATCAAACTGTTCTGCTTGCCATTAACCAAGAGCTTAGAGTACCTGGATGGGATGCCAACAGCTCAAATTACTGCTCTTGGCAAGGCGTAAGCTGTGATAATCACTCAATGGTGGTGAAGCTCGATCTCTCTCATGCAAACCTTCGAGGTAATGTCACTTTAGTGTCCCAGCTCAAAGCCTTGAGGCTGCTtgacctttcagataataattttCATGGGTTCATTCCTCCTGCTTTTGGAAATTTATCTGATCTTGAAGTTCTAGATTTGTCTTCGAATAAGTTCGATGGTTCGATTCCACCAGAATTGGGTGGCCTCAGAAACCTTAAATCGTTGAACCTTTCCAGCAACTTGCTTGTGGGAAAAATACCAGAAGAACTTCATAGGCTACAGAAATTGCAGGAGTTTCAAATTTCTAGTAATCAATTGAGTGGTTCTTTACCGCCTTGGGTGGGAAATTTGACCAGTCTGAGAGTTTTTGCAGCCTATGAGAATCATCTAGATGGTAAGCTTCCAGATAATCTTGGGTTGGCTTCTGAGCTTAGAATACTAAACCTGCATTCAAACCAGCTTCAAGGTCCTATACCAGCAGGCATTTTTGCTGCAGGGAAGCTGGAAGTTCTGGTTCTCACCCAGAACAATTTGAGTGGTGATCTTCCTCCAGAACTTGGGAATTGCCAAGGCCTTTCCAACATCCGAATTGGAAACAATCATCTACTAGGTACTATTCCTAAGACCATTGGAAACATCAGTAGCCTCACCTACTTTGAAGCTGACAATAACAATCTTTCTGGTGAGGTAGTGTCAGAGTTTTCGCGGTGTCCTAATCTCACACTCCTGAACTTAGCCTCCAATGGATTCAGTGGAACAATCCCTCCGGAATTGGGACAGCTTTTGAACCTGCAGGAGTTAATTCTTTCTGGAAATAGCCTGTTTGGCGATATTCCAGAATCAATTTTGAAGTGCAGGAATCTTAACAAGCTTGATATAAGCAATAACAGATTCAATGGGACAATACCAAGTGAAATCTGCAACTTGTCTAGGCTGCAGTTCTTGCTAGTGGGTCAGAATTCCATAAGAGGAGAAATCCCTCATGCAATTGGAAACTGTGCAAAACTTCTCGAATTGCAAATGGGCAGTAACTATTTGACAGGAATTATTCCTTCTGAGATTGGTCATATTAGGAACTTGCAGATAGCTTTAAATTTGAGCTTCAATCATCTTCATGGACCAGTGCCCCCTGAATTAGGAAGACTCGACAAACTTGTCGCTTTGGATGTTTCGAACAACCGTCTCTCTGGCACCATCCCAGCTGATCTGAAGGGAATGTTGAGCTTGATAGAGGTtaacttttcaaataatttgCTCAGTGGCCCAGTACCAGAATTTGTACCATTCCAAAAGAGTCCTAATTCAAGTTTTTTGGGCAACAAGGGGCTTTGTGGAGAGCCATTAAACTCTTCATGTGGAAATGTTTACGGTGACCACAATAACTACCATCACAAAGTTTCCTACAGAATCATACTTGCTGTAATTGGATCTGGTTTGGCAGTTTTTATGTCAGTCACTGTGGTGGTCTTGCTGTTTATGATCAGAGAGAGGCAAGAAAAAGCAGCCAAAGATGCTGGGATTGCTGAGGAAGAAACTAATGCCAAACCAACTATAATAGCAGGGAATATCTTTGTGGAGAATCTAAGACAAGCAATAGACCTCGATGCTGTTGTTAAGGCGACCCTTAAAGATTCTAATAAGCTTAGCAGTGGAACTTTCAGTACAGTTTACAAGGCAGTCATGCCTTCCGGGATGATTGTATCTGTAAGGAGACTCAAATCCATGGACAAGACAATAATCCACCACCAGAACAAGATGATTAGGGAACTTGAGAGGCTGAGCAAACTCTGTCATGACAATCTAGTTCGACCCATCGGATATGTTATTTATGAAGATGTTGCTCTTCTCTTGCATCATTACTTACCCAATGGAACACTGGCTCAGCTTCTTCATGAATCTACCAGGCAACCTGAATATCAACCTGACTGGCCTACTAGATTATCCATTGCCATTGGTGTGGCAGAAGGTTTGGCTTTTCTACATCATGTTGCAATTATCCACCTTGACATTTCTTCCGGCAATGTTCTGTTGGATGCAAATTTCAAGCCTTTGCTAGGGGAGATCGAGATTTCAAAACTTCTTGATCCAACTCGAGGAACTGCAAGTATTAGTGCTGTTGCTGGATCTTTTGGTTACATACCACCAGAATATGCATATACAATGCAAGTTACAGCACCAGGAAATGTTTACAGCTATGGTGTAGTTCTGCTTGAGATCCTCACAAGTCGACCACCGGTTGATGAGGATTTCGATGAAGGCGTAGATTTGGTGAAGTGGGTTCATAGTGCTCCAGTGAGGGGTGAAACTCCAGAGCAGATACTGGATGCAAGGCTCAGCACAGTTTCCTTTGGTTGGAGGAAAGAAATGCTTGCTGCTCTCAAGGTTGCATTGCTCTGCACTGACAGTACACCAGCAAAACGACCCAAGATGAAGAAGGTTGTGGAAATGCTccaagaaataaagaaaaactga 2661 0.4205 MEILYLLYLVLAWYVSKSELVGAESQDQTVLLAINQELRVPGWDANSSNYCSWQGVSCDNHSMVVKLDLSHANLRGNVTLVSQLKALRLLDLSDNNFHGFIPPAFGNLSDLEVLDLSSNKFDGSIPPELGGLRNLKSLNLSSNLLVGKIPEELHRLQKLQEFQISSNQLSGSLPPWVGNLTSLRVFAAYENHLDGKLPDNLGLASELRILNLHSNQLQGPIPAGIFAAGKLEVLVLTQNNLSGDLPPELGNCQGLSNIRIGNNHLLGTIPKTIGNISSLTYFEADNNNLSGEVVSEFSRCPNLTLLNLASNGFSGTIPPELGQLLNLQELILSGNSLFGDIPESILKCRNLNKLDISNNRFNGTIPSEICNLSRLQFLLVGQNSIRGEIPHAIGNCAKLLELQMGSNYLTGIIPSEIGHIRNLQIALNLSFNHLHGPVPPELGRLDKLVALDVSNNRLSGTIPADLKGMLSLIEVNFSNNLLSGPVPEFVPFQKSPNSSFLGNKGLCGEPLNSSCGNVYGDHNNYHHKVSYRIILAVIGSGLAVFMSVTVVVLLFMIRERQEKAAKDAGIAEEETNAKPTIIAGNIFVENLRQAIDLDAVVKATLKDSNKLSSGTFSTVYKAVMPSGMIVSVRRLKSMDKTIIHHQNKMIRELERLSKLCHDNLVRPIGYVIYEDVALLLHHYLPNGTLAQLLHESTRQPEYQPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLLGEIEISKLLDPTRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTSRPPVDEDFDEGVDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDSTPAKRPKMKKVVEMLQEIKKN 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2852 886 ProSitePatterns Tyrosine protein kinases specific active-site signature. 728 740 IPR008266 GO:0004672|GO:0006468
Sto13g2852 886 Gene3D Ribonuclease Inhibitor 228 518 IPR032675 -
Sto13g2852 886 Gene3D Transferase(Phosphotransferase) domain 1 684 886 - -
Sto13g2852 886 CDD STKc_IRAK 611 883 - -
Sto13g2852 886 Gene3D Ribonuclease Inhibitor 26 131 IPR032675 -
Sto13g2852 886 SUPERFAMILY Protein kinase-like (PK-like) 605 883 IPR011009 -
Sto13g2852 886 Coils Coil 877 886 - -
Sto13g2852 886 ProSiteProfiles Protein kinase domain profile. 605 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2852 886 SUPERFAMILY L domain-like 49 245 - -
Sto13g2852 886 Pfam Leucine rich repeat N-terminal domain 31 59 IPR013210 -
Sto13g2852 886 SUPERFAMILY L domain-like 191 510 - -
Sto13g2852 886 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 884 - -
Sto13g2852 886 SMART LRR_typ_2 445 468 IPR003591 -
Sto13g2852 886 SMART LRR_typ_2 324 348 IPR003591 -
Sto13g2852 886 SMART LRR_typ_2 132 155 IPR003591 -
Sto13g2852 886 SMART LRR_typ_2 156 180 IPR003591 -
Sto13g2852 886 SMART LRR_typ_2 372 396 IPR003591 -
Sto13g2852 886 SMART LRR_typ_2 205 228 IPR003591 -
Sto13g2852 886 SMART LRR_typ_2 108 131 IPR003591 -
Sto13g2852 886 SMART LRR_typ_2 84 107 IPR003591 -
Sto13g2852 886 Gene3D Ribonuclease Inhibitor 133 225 IPR032675 -
Sto13g2852 886 Pfam Protein kinase domain 607 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2852 886 Pfam Leucine rich repeat 326 385 IPR001611 GO:0005515
Sto13g2852 886 Pfam Leucine rich repeat 86 145 IPR001611 GO:0005515
Sto13g2852 886 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 1 884 - -
Sto13g2852 886 Gene3D Phosphorylase Kinase; domain 1 568 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2852 Sto-Chr13 33847874 33850839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2852 1 885 Receptor kinase-like Gene Family AT2G41820 73.311 0.0 1314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto13g2852 Pkinase 8.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2852 - - adu:107492611 1470.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2852 13 33847874 33850839 Sto13g2852 13 33847874 33850839 ECH