Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto13g2844 | ATGGCTTCCTCTTCCTCTGATCCTCCCAAGTCCCACCTTCGCTGTGACCTCATCACTACTACTTCCGAGggtggcatgaagaaggatgatGACTTTTTGGTTTACAGAGAATTGAAGAAAGCCAAGAAAGAGAGAGGATGTACGGCCAAAGAACGCATCAGCAAGATGCCTCCTTGTGCTGCTGGCAAACGCAGCTCCATATATCGCGGTGTCACCAGGCATAGATGGACGGGTCGTTACGAAGCACATCTTTGGGATAAAAGTACATGGAACCAAAATCAGAATAAGAAAGGGAAGCAAGGGGCATATGATGATGAAGAGGCTGCAGCTAGAGCATATGACCTTGCTGCTCTGAAATATTGGGGTCCAGGGACTCTCATTAATTTTCCAGTGACTGATTATACAAGAGATCTTGAAGAAATGCAGAATCTTTCAAGAGAAGAATACCTTGCATCTTTACGCCGGAAGAGCAGTGGCTTTTCAAGAGGAATCTCAAAATATCGCGGATTGTCCAGTCGATGGGAACCATCATATGGTCGTATGGCTGGATCTGACTACTTCAATAGTATACATTATGGTACAGGCAAAGATTCAGCTGCAGAAACAGAATATTTGAGTGGTTTCTGTGGAGACAGAAAAATTGATTTAACAGGCTACATCAAGTGGTGGGGATCTAGTAAAAGCCGCCAAACTGATCATTCCGGAACAAAATCATCATCGGAAGAAAAAAAGCGTCGTTTTGCCGGCGATTGTAGCAGTGAACTCAAAGCATTGGAACAGCAAGTCCAGCCTACTGAACCATACCAAATGCCACAGTTAGGAATAGCACATGATGAAAAAAAGCATAGAAGTTCTTCAGTTTCCGCCTTAAGTATCTTGTCGCGATCGGCTGCATACAAGAGCTTGCAAGAGAAAGCATCATCAAAGAGAGATGAAAATAGCACTACTGATGCTGATGAAAATGAGAACAAAAATACCATTAATAAGATGATTGACCGTGGAAAAGCAGTAGAGAAATCATCAAACCATGAGAGTGGAAATGAAGGACCTGAAGCTGCAATAATGGACATGAGTAGTGGAGCATTGTCTCTTCAAAGAAATGTTTACCCATTGCCTCCTTTCTTGTCTGCACCACTTTTGACAGCTTATAATAATACTGTTGACCCCTTATTAGATCCTGTTCTCTGGACCTCTCTTGCTCCTATACTTCCTCAGGTTACAAAGACGGAGGCTAGTTCATCTTACACCATGTTTGGGCCAGAGGAGTGA | 1269 | 0.4247 | MASSSSDPPKSHLRCDLITTTSEGGMKKDDDFLVYRELKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNLSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGRMAGSDYFNSIHYGTGKDSAAETEYLSGFCGDRKIDLTGYIKWWGSSKSRQTDHSGTKSSSEEKKRRFAGDCSSELKALEQQVQPTEPYQMPQLGIAHDEKKHRSSSVSALSILSRSAAYKSLQEKASSKRDENSTTDADENENKNTINKMIDRGKAVEKSSNHESGNEGPEAAIMDMSSGALSLQRNVYPLPPFLSAPLLTAYNNTVDPLLDPVLWTSLAPILPQVTKTEASSSYTMFGPEE | 422 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto13g2844 | 422 | Gene3D | AP2/ERF domain | 67 | 132 | IPR036955 | GO:0003700|GO:0006355 | |
Sto13g2844 | 422 | MobiDBLite | consensus disorder prediction | 226 | 250 | - | - | |
Sto13g2844 | 422 | MobiDBLite | consensus disorder prediction | 304 | 345 | - | - | |
Sto13g2844 | 422 | MobiDBLite | consensus disorder prediction | 302 | 352 | - | - | |
Sto13g2844 | 422 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 30 | 416 | - | - | |
Sto13g2844 | 422 | PRINTS | Ethylene responsive element binding protein signature | 68 | 79 | IPR001471 | GO:0003700|GO:0006355 | |
Sto13g2844 | 422 | PRINTS | Ethylene responsive element binding protein signature | 112 | 132 | IPR001471 | GO:0003700|GO:0006355 | |
Sto13g2844 | 422 | ProSiteProfiles | AP2/ERF domain profile. | 67 | 130 | IPR001471 | GO:0003700|GO:0006355 | |
Sto13g2844 | 422 | MobiDBLite | consensus disorder prediction | 234 | 250 | - | - | |
Sto13g2844 | 422 | PANTHER | BNAA03G19580D PROTEIN | 30 | 416 | - | - | |
Sto13g2844 | 422 | Pfam | AP2 domain | 67 | 122 | IPR001471 | GO:0003700|GO:0006355 | |
Sto13g2844 | 422 | SUPERFAMILY | DNA-binding domain | 66 | 131 | IPR016177 | GO:0003677 | |
Sto13g2844 | 422 | SMART | rav1_2 | 67 | 136 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto13g2844 | Sto-Chr13 | 33795984 | 33798893 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto13g2844 | 30 | 404 | AP2-EREBP Transcription Factor Family | AT2G41710 | 63.708 | 4.37e-149 | 429 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Sto13g2844 | AP2 | 2.1e-09 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto13g2844 | K09285 | - | gmx:100786651 | 597.816 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Sto13g2844 | 13 | 33795984 | 33798893 | Sto13g2844 | 13 | 33795984 | 33798893 | ECH |