Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2840 ATGGAGGATTGCTCAAGAACTGGATTCCACGATTTGAATCTGGCTTCAAGAAAAGCTGAAGAAGCGGCATGGAGACGATATGAAGCTGCCAAGTGGCTAGAAACCGAAGTGGGTCCGCTCGGCTTATCCAATCAGCCATCAGAGAGAGAATTCATTTCTTGCTTAAGAAATGGTCTGATTCTCTGCAATGCAATCAACAAGATTCATCCAGGAGCAGTCACCAAGGTTGTGGATAGTCAAGTGCCTTCGCAATCAATTACCAGGGACTCCCAGCCTTTGCCTGCCTACCAGTACTTTGAAAATGTCAGGAACTTTCTGGTTGCTGCAGATGAATTAAAGATTCCTGCTTTTGAAGCTTCTGATATTGAACggGATACAGTAGAGATCGGATCAGTATCTAAGGTTGTTGATTGCATTTTAGCACTAAAATCACATCAAGAGTGGAAGCTGACAAACACAGAGAATGGATATCACAAACACGTAAAATCTCCTTTAGTTATGCAATCTGCCAGTAGAATGCATTCAAGAGCTCCAGTAGCATTCTCGTCAGATGCCTGTAGGCGCTTGGATTTGTCTGCCACATCAGAAAAAGAGCACTCTCTTCAGGGTGATGTTCAAAATCCAGAAGCCAAAATTGTGGAAGCAATTGTCAAGCTACTGGTTGACTGTATGGTTGACGCCAAAGAGAATATTGACGGAAACCTTGTTGCTTCCCTTCATAATGGACAACAGGATCCAATTAAACTATTTAGTGTGATCATGTCAACTTGCTTAGGGGAACAGCTCCAAACAAAGTGCCCTGAGTTAGCATTGCTGCTGAGAGattttataaaagaaaggaGTAGTTTACCTTCTCATTCAGCATCCAAACCATCAGATGATTTATCTACACTGGAAAGTTCCAAGTGTTGCAGAGGTTGCACTGCTAAATGCACTTGCAGCCAGAAGCATCTCCTTGACATGCAGGAAAAAGAACTTGTGGATCTCAAGGCTCTAGTGTTAAAAACTAAGAATGAGTTTAAAGAGATGCAGTCCCACTTTCAGAGAGATTTGAATGATCTTGGAAGTCAAGTACTGGAGATGTCCGCTGCTGCATCTGGATACTACAAGGTGGTGAAAGAAAACAGTAAATTATACAATATGGTTCAAGATTTAAAAGGTAGTATTCGAGTTTACTGCAGAATTAGGCCCTCCTTCAGTGCTGAATCCAAGAATGTCATAGATTTTGTCGGGGAGGATGGTTCTCTGGTCATATTAGATCCATTTAAAACTCAAAAAGATGGAAGGAAGGTCTTTCAGTTTAATCGGGTTTTTGGTTCAACAGCAAGCCAAGATGAAATTTACAAGGACACTCAACCGTTAATTAGATCAGTGATAGATGGATATAACGTATGTATATTTGCCTATGGACAAACTGGATCTGGGAAGACATATACCATGAGTGGGCCATCAGGTGGATCTTCTAAAGACATGGGGATTAATTATCTTGCTCTAAACGATCTTTTCCGGATGTCTAGTCAACGAAAGGACATTATAACTTATGACATTTATGTTCAAATGGTTGAGATTTACAATGAACAAGTACGAGATCTACTAGCAGAAGAAAGAACAGACAACAGATTAGAGATAAGAAGTTGCAATGAAAATGGCTTGAGCCTCCCAGATGCTACATTGCGTTCTGTAAAGTCTACACATGATGTTTTGAGCCTTATGAAACTTGGTGAGGTTAACCGTGCTGTTAGTTCCACTGCCATCAACAACCGGAGCAGTCGTTCCCACAGTGTCCTGACTGTGCATGTTCATGGCAAAGACATCTCTGGGAACACAATTCGCGGTTGCTTGCATTTGATTGACCTTGCGGGAAGCGAGAGAGTGGAGAAGTCTGAAGTTACCGGGGAAAGACTAAAGGAAGCACAATTCATTAACAAGTCGCTTTCCTGTTTGGGAGATGTGATCACAGCCCTCGCTCAAAAGAACTCACATATCCCTTACAGGAATAGTAAACTCACTCTTCTGCTGCAGGATTCTTTAGGTGGGCATGCCAAAACATTGATGTTTGCTCATGTAAGTCCAGAGGATGATTCCTTTGGCGAAACAGTCAGTACTCTAAAGTTCGCTCAGCGGGTTTCCACTGTGGAACTTGGGGCAGCTCGTTCGAACCGAGAAAGCAGTGAGGTTATGCAACTTAAAGAACAGATTGAGAACCTTAAGATGGCACTGTCAAATAAGGAAGCACAGAGAGTACAGCTCAGTAGGAGTAAAGAACCACGAACTCCATCTGAGAAAACTCCATTGCGCCTTCGAAGGCTTAGCATTGAGAACTGCAGCGCCACAAGAACTGATGAAAACTCTATGAAGCCTGAGGATAAAAGTGGAATTAAATCACCTTCTTTCTTACCTCGTTCAAGAAGATTGAGCCTGGAAGGTTCAAAAAGCATCAAGAAAGACACTACACAGCCCAAGGTTATAACTGATGTAAGCAAACCTCTACAATTTGATTCAGTGTCTCACTCTCTGCAGAAAAACCGTCCTCTGCATGATGCAGAAGCAGTGTCAAAGCTATATGGCCATTTCAGCAATAGCAGTTCCAAGTTAGAGTTGCACACAAAAGCTCCTCGTAGTCCTACCAGCATTACCTACCATAAGAGAGTAATAAAAATCGATCGTGGAACCCAAATTCATCCTCTTAAACTGCCTCAGACACCTGAAGCAGCACAAGGGTTTGATAGAAATGGTGCATATGGAGCTTTAAGGAGTGATATTGCACTTTCCACTGATTTTCAGACACCAAATGTGATAACTAGCGCATATGGTAAAGGATCCCACATAAGGAGATCCTTAAGGACAATAGGGAAACTGATTAATGGCCCAGACAAGAGGAGCCAACAAAGTTTGGTTGAAGTGAAGTCACCCATCAAGAGCAATACTTACATAAATGATGCAAAATCACCACCAACTTCTGCTGCTAGGACTAGAAGGAGGCAATCTTTAACGGGGATTCAAGCTAGCATTGAAAACTCTCGCAGAACTTCTCTTGGAGGGAAGTCAGTGACCACCAATGAGAAAGGGCAGAGAAACGTGAAAACGCCTCCTCCAGTTCGCTCAGCCTCAAAGACAGGAAAACGGTGGCTATAA 3135 0.4236 MEDCSRTGFHDLNLASRKAEEAAWRRYEAAKWLETEVGPLGLSNQPSEREFISCLRNGLILCNAINKIHPGAVTKVVDSQVPSQSITRDSQPLPAYQYFENVRNFLVAADELKIPAFEASDIERDTVEIGSVSKVVDCILALKSHQEWKLTNTENGYHKHVKSPLVMQSASRMHSRAPVAFSSDACRRLDLSATSEKEHSLQGDVQNPEAKIVEAIVKLLVDCMVDAKENIDGNLVASLHNGQQDPIKLFSVIMSTCLGEQLQTKCPELALLLRDFIKERSSLPSHSASKPSDDLSTLESSKCCRGCTAKCTCSQKHLLDMQEKELVDLKALVLKTKNEFKEMQSHFQRDLNDLGSQVLEMSAAASGYYKVVKENSKLYNMVQDLKGSIRVYCRIRPSFSAESKNVIDFVGEDGSLVILDPFKTQKDGRKVFQFNRVFGSTASQDEIYKDTQPLIRSVIDGYNVCIFAYGQTGSGKTYTMSGPSGGSSKDMGINYLALNDLFRMSSQRKDIITYDIYVQMVEIYNEQVRDLLAEERTDNRLEIRSCNENGLSLPDATLRSVKSTHDVLSLMKLGEVNRAVSSTAINNRSSRSHSVLTVHVHGKDISGNTIRGCLHLIDLAGSERVEKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEDDSFGETVSTLKFAQRVSTVELGAARSNRESSEVMQLKEQIENLKMALSNKEAQRVQLSRSKEPRTPSEKTPLRLRRLSIENCSATRTDENSMKPEDKSGIKSPSFLPRSRRLSLEGSKSIKKDTTQPKVITDVSKPLQFDSVSHSLQKNRPLHDAEAVSKLYGHFSNSSSKLELHTKAPRSPTSITYHKRVIKIDRGTQIHPLKLPQTPEAAQGFDRNGAYGALRSDIALSTDFQTPNVITSAYGKGSHIRRSLRTIGKLINGPDKRSQQSLVEVKSPIKSNTYINDAKSPPTSAARTRRRQSLTGIQASIENSRRTSLGGKSVTTNEKGQRNVKTPPPVRSASKTGKRWL 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2840 1044 Gene3D - 10 168 IPR036872 -
Sto13g2840 1044 MobiDBLite consensus disorder prediction 743 825 - -
Sto13g2840 1044 Coils Coil 719 753 - -
Sto13g2840 1044 MobiDBLite consensus disorder prediction 976 1033 - -
Sto13g2840 1044 Coils Coil 319 339 - -
Sto13g2840 1044 PANTHER KINESIN-LIKE PROTEIN KIN-14L 3 1032 - -
Sto13g2840 1044 SMART ch_5 25 145 IPR001715 GO:0005515
Sto13g2840 1044 Pfam Kinesin motor domain 394 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g2840 1044 MobiDBLite consensus disorder prediction 976 1044 - -
Sto13g2840 1044 Pfam Calponin homology (CH) domain 25 146 IPR001715 GO:0005515
Sto13g2840 1044 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Sto13g2840 1044 Gene3D Kinesin motor domain 330 715 IPR036961 -
Sto13g2840 1044 SUPERFAMILY Calponin-homology domain, CH-domain 22 158 IPR036872 -
Sto13g2840 1044 ProSiteProfiles Kinesin motor domain profile. 388 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g2840 1044 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 1032 - -
Sto13g2840 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 745 IPR027417 -
Sto13g2840 1044 SMART kinesin_4 386 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g2840 1044 PRINTS Kinesin heavy chain signature 461 482 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g2840 1044 PRINTS Kinesin heavy chain signature 583 600 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g2840 1044 PRINTS Kinesin heavy chain signature 613 631 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g2840 1044 PRINTS Kinesin heavy chain signature 662 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g2840 1044 MobiDBLite consensus disorder prediction 748 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2840 Sto-Chr13 33744639 33751139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2840 334 712 Calmodulin-binding Proteins AT5G65930 40.769 1.69e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2840 K10406 - gmx:100786642 1372.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2840 13 33744639 33751139 Sto13g2840 13 33744639 33751139 ECH