Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2827 ATGTCATATTTCTTCATGGCAAAGTGGAACTGCTGGTTTGGATGGGGTAAAAAGCTCTTAACTTCAGAATCAAAACCAAAAAATTCAAAGAAATGGAGATGGGGTCTTAGGAGGTTGAAGGTGAAACAGTGTCCCACGCTAGAAGAACCAAATAGAAGGCTAAGTGAAGCAAGAGAAGAACAGAGAAAGCATGCTTTGACAGTGGCCATTGCAACAGCAGCTGCTGCAGAGGCTGCAGTTGCTGCTGCTCATGCTGCTGCTGAGGTTGTCAGGCTCACAGGTGCTTCTCGCTCCTATTCTTATCTGTCCAGAGGAGACCGAAACTTAGCCGCCATTAGAATTCAAAGCGCATACCGTGCACATCTTGCTAGGAAAGCATTAAGATCATTGAAGGGAATTGTAAGACTGCAAGCTATAGTTCGTGGTCGAGCTGTGAGACGGAAAATGTTCAGCACTTCGCAGAATTTACCCTCCAACTCAAAAAAGCAGGCAGGATCCCAGAAAAGAAGCAGTCATGCTGCAAAAGAAATCAACAAAAATGACAAGAGCAAGCAGCTTCTAAAGCAGAAAAAGAAGTTAGAAGAAACAGAAATGAAGCCTGAATGCCATGGTCAAAGAACTTGGGATTGCAGCTTGCACTCAAAAGAGGACAGTGAAGCCATATGGCTAAAAAAGCAAGAGGCTATTTTCAAAAGGGAGCGAATGAAGCAGTACTCTTTCTCACAACGGGAGAGAAAAATTTCCCACATGGTGGAAGAGTCCATGCTAAATAAGGAATTTGGAGGGGAGAGCTGCCGTACTCTTGGACAATGGCTGGATGAAGAAAAAGGTAATCAGGATGTGTCGCATAAAATAGCTTTTCCTTCAAACTTGATTATGAGGGAATGGTATGATACAACACAAGTTGCTACAGAGAAGAGTCTGAAAATAGAACATTTGCAAGAAGATGAATCGACTTCACAGATGTCATTCCCAAGGCAGTCAATTTCTCAAGTGAAGAAAAATTCAGTTGGAGATGAAAGCTCTATGCCAAATTCTCCATTTTTTCCCACTTACATGGCTGTGACAGAATCTGCTAAAGCAAAGGCAAGGTCTCTGAGTACGCCAAGGCAAAGAACAGGATATCTGGATGTATGCTCAGATCAGAGTGATTCTCACACAGAAGCCATGTCTTTTAGGTCTTCTTGTTATGGTGCAACTAGAAGCGCCCATGGAAAAAATGAAGTTTCTCAGCAAAGATATTAG 1245 0.4273 MSYFFMAKWNCWFGWGKKLLTSESKPKNSKKWRWGLRRLKVKQCPTLEEPNRRLSEAREEQRKHALTVAIATAAAAEAAVAAAHAAAEVVRLTGASRSYSYLSRGDRNLAAIRIQSAYRAHLARKALRSLKGIVRLQAIVRGRAVRRKMFSTSQNLPSNSKKQAGSQKRSSHAAKEINKNDKSKQLLKQKKKLEETEMKPECHGQRTWDCSLHSKEDSEAIWLKKQEAIFKRERMKQYSFSQRERKISHMVEESMLNKEFGGESCRTLGQWLDEEKGNQDVSHKIAFPSNLIMREWYDTTQVATEKSLKIEHLQEDESTSQMSFPRQSISQVKKNSVGDESSMPNSPFFPTYMAVTESAKAKARSLSTPRQRTGYLDVCSDQSDSHTEAMSFRSSCYGATRSAHGKNEVSQQRY 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2827 414 PANTHER IQ-DOMAIN 12 6 405 - -
Sto13g2827 414 Gene3D - 105 155 - -
Sto13g2827 414 MobiDBLite consensus disorder prediction 150 171 - -
Sto13g2827 414 SMART iq_5 106 128 IPR000048 GO:0005515
Sto13g2827 414 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
Sto13g2827 414 Pfam Protein of unknown function (DUF4005) 334 397 IPR025064 -
Sto13g2827 414 MobiDBLite consensus disorder prediction 150 186 - -
Sto13g2827 414 MobiDBLite consensus disorder prediction 172 186 - -
Sto13g2827 414 Coils Coil 179 199 - -
Sto13g2827 414 Pfam IQ calmodulin-binding motif 110 128 IPR000048 GO:0005515
Sto13g2827 414 ProSiteProfiles IQ motif profile. 131 158 IPR000048 GO:0005515
Sto13g2827 414 PANTHER IQ-DOMAIN 5-RELATED 6 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2827 Sto-Chr13 33617587 33619826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2827 6 395 IQD Protein Family AT5G03960 44.584 6.81e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2827 - - gmx:100800767 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2827 13 33617587 33619826 Sto13g2827 13 33617587 33619826 ECH