Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2797 ATGGGAATGGCTGCGGAATCCCAATTTCATGTTTTGGCTGTGGATGACAGCCTGATTGATAGGAAGCTGATTGAGAGGCTGCTCAAAACCTCTTCGTATCAAGTTACTACAGTGGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGCTTACGTCAGAATGACCAGATCGACCCAAATACACCACCTGTTTCTCCTGGAAATCATCAGGAAGTGGAGGTGAATCTTATTATTACAGATTACTGTATGCCTGGCATGACAGGCTATGATTTactcaagaaaatcaagGAATCTTCGTCTTTGAGAAACATACCGGTGGTGATTATGTCGTCGGAGAATGTGCCTTCGAGGATAAACAGATGCTTGGAGGAAGGAGCAGAGGAATTTTTCTTGAAACCAGTGAGGCTGGCAGATTTGAATAGGCTTCGACCCCATTTGATGAAGACCAAGTTGAAAGATCAGAAGCCAGAAACACAAGAAAATCCAGAACTTGAAAAACAAGAATTAGACCAAATTGATGAGCATCTAACACTAGAACCTCCATCATCACAGCCTCAACTAGATCAACAACAATCACAACAAGCAGTAGCGAGTAATAACAAGAGAAAGGCCATAGAACAAGGCCTTTCATCTGAGACTGATAGAACAAGACCAAGATACAGTGGCATAGCCACAGTGGTATGA 681 0.42 MGMAAESQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLRQNDQIDPNTPPVSPGNHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLADLNRLRPHLMKTKLKDQKPETQENPELEKQELDQIDEHLTLEPPSSQPQLDQQQSQQAVASNNKRKAIEQGLSSETDRTRPRYSGIATVV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2797 226 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Sto13g2797 226 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 3 222 - -
Sto13g2797 226 SMART REC_2 9 142 IPR001789 GO:0000160
Sto13g2797 226 SUPERFAMILY CheY-like 8 147 IPR011006 -
Sto13g2797 226 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 222 IPR045279 GO:0009736
Sto13g2797 226 CDD REC_typeA_ARR 11 141 - -
Sto13g2797 226 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Sto13g2797 226 MobiDBLite consensus disorder prediction 176 205 - -
Sto13g2797 226 MobiDBLite consensus disorder prediction 176 226 - -
Sto13g2797 226 Gene3D - 10 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2797 Sto-Chr13 33450558 33452033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2797 1 226 Response Regulator Gene Family AT3G57040 65.560 3.29e-103 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto13g2797 Response_reg 9.1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2797 K14492 - tcc:18598779 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2797 13 33450558 33452033 Sto13g2797 13 33450558 33452033 ECH