Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2780 ATGCCTAGCTACGCTCCTCAGTTGCCTACTTCTAGTTCCATGGGCATAGAAGGATCTGCTGTTCATCATTCTCAAATTTCTGAATTTGGAACGCTTGAGCAATCTCTTGGATTTCGTGTAGAGGATGCTATCAATCTTAGCAGAAATCCATTGTTCAGTCAAATGAAGTCAAACAGCCAAGCTCTAGGTGATGTTCAATTTGGCGCTTTGAGTAAGATGCAGTCAATAGCATCCTCAGATATGAACCTCTCTGCTGCAATTGCTGGATCTCAGACATTGCCATTACAAAAAGATTCACAAACAAATCTAGCTTCTACATCTGCTGCCCATCGTGAGAACTGGGGGGAGTCAAACATTGCAGATGGAAGCCCAATGACTGATACTTCAACAGATGATACAGATGATAAAAATCAAAGGCCTGAAAGGGGTCAATCAGCTGTCGCAATCTCTGATTCCAGTGATAGATCAAAAGATAAAACGTTACGACGGCTAGCTCAAAATCGTGAGGCTGCCAGAAAAAGCCGGCTAAGGAAAAAGGCATATGTACAACAATTAGAGAGTAGCAGGCTGAAACTGACCCAACTTGAGCAGGAACTCCAGCGTGCCCGCCAGCAGGGCATATTCATTTCAAGCGCTGGAGATCAGTCCCATTCAATGAGTGCGAATGGTGCTATGGCATTTGATGTAGAGTATGCACGATGGTTAGAGGAGCATAATAGGCAGATCAATGAGCTAAGGGCTGCGGTCAATTCTCACGCTGGAGATATTGAACTGCGTACAATTGTTGACAATGTCATGACACACTTCGATGAGATTTTCAGGCTGAAAGGTGTTGCAGCAAAAGCTGATGTTTTCCACATTCTGTCTGGAATGTGGAAGACTCCAGCTGAAAGGTGTTTCATGTGGATTGGAGGCTTCCGCTCATCTGAGCTTCTCAAGCTTCTCGTAAATCAATTGGAGCCTTTGACCGAGCAACAACTGATGGGCATCTACAATTTGCAGCAGTCTTCCCAGCAGGCTGAAGATGCTCTATCCCAAGGAATGGATGCATTGCAGCAATCACTAGCTGAGACACTCGCTAATAATTCGCCCACCCCGTCAGGCTCATCTGGCAATGTGGCAAATTATATGGGTCAAATGGCCATGGCCATGGGAAAGCTTGGTACTCTTGAGGGCTTTCTTCGCCAGGCTGATAATCTGCGGCAGCAAACATTACAACAAATGCTGCGAATATTAACAACCAGGCAATCAGCTCGGGCTCTTCTCGCAATAGGTGATTATTTCTCCCGGCTACGAGCCCTAAGTTCTTTGTGGCTTGCCCGGCCGAGGGAATGA 1335 0.4599 MPSYAPQLPTSSSMGIEGSAVHHSQISEFGTLEQSLGFRVEDAINLSRNPLFSQMKSNSQALGDVQFGALSKMQSIASSDMNLSAAIAGSQTLPLQKDSQTNLASTSAAHRENWGESNIADGSPMTDTSTDDTDDKNQRPERGQSAVAISDSSDRSKDKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSAGDQSHSMSANGAMAFDVEYARWLEEHNRQINELRAAVNSHAGDIELRTIVDNVMTHFDEIFRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLAETLANNSPTPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAIGDYFSRLRALSSLWLARPRE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2780 444 Pfam bZIP transcription factor 157 199 IPR004827 GO:0003700|GO:0006355
Sto13g2780 444 CDD bZIP_HBP1b-like 159 211 - -
Sto13g2780 444 SUPERFAMILY Leucine zipper domain 159 202 IPR046347 GO:0003700|GO:0006355
Sto13g2780 444 MobiDBLite consensus disorder prediction 96 127 - -
Sto13g2780 444 Gene3D - 158 210 - -
Sto13g2780 444 SMART brlzneu 155 218 IPR004827 GO:0003700|GO:0006355
Sto13g2780 444 Coils Coil 178 205 - -
Sto13g2780 444 Coils Coil 235 255 - -
Sto13g2780 444 Pfam Seed dormancy control 241 316 IPR025422 GO:0006351|GO:0043565
Sto13g2780 444 MobiDBLite consensus disorder prediction 96 162 - -
Sto13g2780 444 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 162 177 IPR004827 GO:0003700|GO:0006355
Sto13g2780 444 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 54 444 - -
Sto13g2780 444 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 157 201 IPR004827 GO:0003700|GO:0006355
Sto13g2780 444 ProSiteProfiles DOG1 domain profile. 224 441 IPR025422 GO:0006351|GO:0043565
Sto13g2780 444 PANTHER TRANSCRIPTION FACTOR TGA9 54 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2780 Sto-Chr13 33330451 33334767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2780 119 444 bZIP Transcription Factor Family AT3G12250 76.133 2.68e-177 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto13g2780 DOG1 4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2780 K14431 - gmx:778136 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2780 13 33330451 33334767 Sto13g2780 13 33330451 33334767 ECH