Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2775 ATGTCTCACACTCACTCCTCTGCTATGGCAATAACATTTGTGCTGTTTCTTGCACAAATCTTTGTGTCAGTGACTTCATCTTCAGAAGCTGATAAGATAATCAGTTTGCCAGGGCAGCCTGAAGTGACATTCCAGCAGTATTCTGGTTACATTACCGTTGATGAGAAGCAGCACAGAGCTCTTTTTTACTATTTTGCTGAAGCAGAAACTGACCCCGCTTCCAAGCCATTAGTTCTCTGGTTAAATGGAGGGCCTGGTTGTTCATCTGTGGGAGCTGGAGCTTTTGTTGAGCATGGACCTTTCAAACCAAGTGAAAGACTTCTTCTGAAAAATGAGTATAGTTGGAACAAAGAGGCGAATATGCTGTACTTGGAATCACCAGCTGGTGTTGGTTTCTCCTACTCGGCCAACGAATCTTTCTATGAATTTGTCACCGATGATATCACAGCAAGGGACAATCTTGTTTTCCTGCACCGTTGGTTCACTAGGTTCCCACAGTACAAAAAGAATGATTTCTTCATTACAGGGGAAAGCTATGCAGGCCACTATGTTCCCCAACTTGCACAACTCATTGTTCGAACCAAGACGAGGTTCAATCTCAAGGGGATAGCTATAGGGAATCCTCTTCTGGAATTCAACACTGATCTAAACTCCAGAGCTGAGTTCTTTTGGTCCCACGGACTAATATCTGATTCAACTTACAAGGTTTTCACTACAGTCTGCAATTATTCCCAGATTTGGCGAGAGTATCAAAGTGGGAATCCCACTGCTGTTTGTGCACAAGTCAATAAACTAGTGAAAAGGGAGATTAGTAGATTTGTGGATGCATATGATGTGACTCTTGATGTCTGCTTGTCAACAATAGATCAGCAGGCTCAGATGCTAAATCAACTGCAAGAGACAGAGAAGATAGATGTTTGTTTGGAAGATGAAACATTTACATACTTGAACAGGAAGGAAGTGCAGGAAGCTCTCCATGCTAAGCTTGTAGGAGTAACCAGCTGGTCAGTTTGCAGCGAGGTACTCAGATATAACATGCAGAATCTAGAGATACCAACAGTTCCTATTCTAGGAGAACTTGTTAAGTCTGGCATCCAGGTCTTCGTGTTCAGTGGAGATCAAGATTCAGTTGTTCCATTAATAGGGACGCGTTCTCTGGTGAATAAATTAGCCAAGGACTTAGGACTGAATACAACGGTACCCTATAGAGCCTGGTTTGCGGGAAAGCAGGTTGCTGGATGGACGCAAGTTTATGGTGACATCTTATCATTTGCCACCATAAGAGGGGCAGCTCATGAAGCTCCGTTTTCACAGCCAGAGAGATCGCTCGTATTACTTAGCGCATTGCTTGAAGGACAGCCACTTCCAGAAGCAGTCTTCTCAAGATAA 1389 0.4348 MSHTHSSAMAITFVLFLAQIFVSVTSSSEADKIISLPGQPEVTFQQYSGYITVDEKQHRALFYYFAEAETDPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSERLLLKNEYSWNKEANMLYLESPAGVGFSYSANESFYEFVTDDITARDNLVFLHRWFTRFPQYKKNDFFITGESYAGHYVPQLAQLIVRTKTRFNLKGIAIGNPLLEFNTDLNSRAEFFWSHGLISDSTYKVFTTVCNYSQIWREYQSGNPTAVCAQVNKLVKREISRFVDAYDVTLDVCLSTIDQQAQMLNQLQETEKIDVCLEDETFTYLNRKEVQEALHAKLVGVTSWSVCSEVLRYNMQNLEIPTVPILGELVKSGIQVFVFSGDQDSVVPLIGTRSLVNKLAKDLGLNTTVPYRAWFAGKQVAGWTQVYGDILSFATIRGAAHEAPFSQPERSLVLLSALLEGQPLPEAVFSR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2775 462 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Sto13g2775 462 SUPERFAMILY alpha/beta-Hydrolases 34 456 IPR029058 -
Sto13g2775 462 Pfam Serine carboxypeptidase 38 451 IPR001563 GO:0004185|GO:0006508
Sto13g2775 462 Gene3D - 353 452 - -
Sto13g2775 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Sto13g2775 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Sto13g2775 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Sto13g2775 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Sto13g2775 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 459 IPR001563 GO:0004185|GO:0006508
Sto13g2775 462 Gene3D - 307 342 - -
Sto13g2775 462 Gene3D alpha/beta hydrolase 27 286 IPR029058 -
Sto13g2775 462 PANTHER CARBOXYPEPTIDASE 15 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2775 Sto-Chr13 33311553 33313843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2775 315 455 Calmodulin-binding Proteins AT2G22960 26.950 8.16e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2775 K16297 - gmx:100805028 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2775 13 33311553 33313843 Sto13g2775 13 33311553 33313843 ECH