Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2762 ATGTCGTCGTCAGGTTCGTGGTCTGCTAAGGACAACAAGGCCTTTGAGAGGGCTCTAGCAGTTTATGACAAGGACACCCCTGACCGTTGGTACAATGTTGCAAAGGCTGTTGGTGGAAAAACTCCTGAGGAAGTCAAGAGGCACTATGAGGTCCTTGTGGAGGACGTTCACCATATTGAATTAGGACGAGTGCCCTTCCCTAATTACAAGAATACTCCACCACCCTCTACCGACCAAAAAAGGCTGAGGAACCTGAATCTGCAGTGA 267 0.4906 MSSSGSWSAKDNKAFERALAVYDKDTPDRWYNVAKAVGGKTPEEVKRHYEVLVEDVHHIELGRVPFPNYKNTPPPSTDQKRLRNLNLQ 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2762 88 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Sto13g2762 88 SUPERFAMILY Homeodomain-like 6 60 IPR009057 -
Sto13g2762 88 Gene3D - 1 66 - -
Sto13g2762 88 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 88 - -
Sto13g2762 88 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 88 IPR044636 GO:0003700
Sto13g2762 88 MobiDBLite consensus disorder prediction 64 88 - -
Sto13g2762 88 CDD SANT 6 53 IPR001005 -
Sto13g2762 88 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Sto13g2762 88 MobiDBLite consensus disorder prediction 73 88 - -
Sto13g2762 88 Pfam Myb-like DNA-binding domain 5 50 IPR001005 -
Sto13g2762 88 SMART sant 3 55 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2762 Sto-Chr13 33230034 33230382 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto13g2762 Myb_DNA-binding 4.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2762 - - gmx:778061 152.91