Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2754 ATGGCTACAAGACTCGTTGTTCCACCACAACAAGGCCGAGGTATTGCTTGCGCTTCTTTGATTTTCCCATCATTACTTGGGATTTTCTTTCTCAACCCTGCATCCAAATTAGTTAAAGGTGAGGCGGTCCTTGGGGAAGCAAAGCCGCAGAAGAAGAATGGTGGAGGTGAGGGAAGACCTCGCAGAGCCCTTGGCGACATAGGAAATCAGGTCACCCTTAGAGGAATCGAAGGCGTCAAACCCAACCGTCCAAAACAGGCTATTCCTAATGTGGCTGGACCTCAGGTTGTTCTTGATGGGGTTGCAATGGCTGCCAAAAGAGAGGCACCAATTCCAGCCCACAGAAAGCCCACTGTCAAACCCTCCAAGACACAAGAAGTCAGATCTGATCAAGAAACTCACAAAGACAAGTCTGTGACCAATAAAAAGGAAGGAGATCATGCCAACTCAAAGAAGAAACCACATACTCTCACTTCTGTACTCACCGCTCGAAGCAAgGCAGCATGCGGTGTGACTAACAAACCAAAGGAGCAGATTGTGGACATTGATGCGGCTGATGCTTCTAATGAACTTGCTGCTGTGGAATACATTGAAGACATTTACAAGTTCTATAAGCTGCATGAGAGTCGTCCTCGCGACTACATTCACTCACAGCCTGAGATCAATGAAAGAATGAGAGCAATACTGATTGATTGGCTGACAGATGTCCACACCAAGTTTGACCTTTCCCTTGAAACTCTTTATCTGactattaatataattgatcGCTTCCTCTCAATCAAGACTGTCCCAAGAAAGGAACTTCAATTGGTGGGCATCACTGCCATGCTTATGGCTTCCAAGTATGAAGAAATCTGGCCCCCTCAGGTCAACGACTTTGTGTGCCTCTCAGACAGAGCTTACACTCACCAACAGATACTTGCAATGGAGAAAACCATATTGGGCAAGCTGGAATGGACTTTGACTGTGCCTACACATTATGTTTTCCTTGTTCGTTTCACCAAGGCGTCCGTTCCAGATGAGGAGTTGGAAAACATGGTCCATTTTCTGTCTGAGTTGGGAATGATGAACTATGCCCCCACCATTATGTATTGTCCATCCATGGTTGCTGCTTCAGCAGTCTTGGCTGCTCGTGATTGTGCTAGGCTACTGGTGAGCTACCACTCGATGGCTGGAAATGGAAAGCTTCAAGCTGTATACAAAAAGTACTCAGATTTCAAGAGAGGAGCTGTAGCATTGAATCCACCAGCGAAGAATCTCATGCCCACAGCTTCTGCTGCTGTTACTAGAGTTTGA 1296 0.4591 MATRLVVPPQQGRGIACASLIFPSLLGIFFLNPASKLVKGEAVLGEAKPQKKNGGGEGRPRRALGDIGNQVTLRGIEGVKPNRPKQAIPNVAGPQVVLDGVAMAAKREAPIPAHRKPTVKPSKTQEVRSDQETHKDKSVTNKKEGDHANSKKKPHTLTSVLTARSKAACGVTNKPKEQIVDIDAADASNELAAVEYIEDIYKFYKLHESRPRDYIHSQPEINERMRAILIDWLTDVHTKFDLSLETLYLTINIIDRFLSIKTVPRKELQLVGITAMLMASKYEEIWPPQVNDFVCLSDRAYTHQQILAMEKTILGKLEWTLTVPTHYVFLVRFTKASVPDEELENMVHFLSELGMMNYAPTIMYCPSMVAASAVLAARDCARLLVSYHSMAGNGKLQAVYKKYSDFKRGAVALNPPAKNLMPTASAAVTRV 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2754 431 MobiDBLite consensus disorder prediction 107 159 - -
Sto13g2754 431 Pfam Cyclin, C-terminal domain 324 379 IPR004367 -
Sto13g2754 431 Pfam Cyclin, N-terminal domain 199 321 IPR006671 -
Sto13g2754 431 PIRSF Cyclin_A_B_D_E 377 429 IPR039361 -
Sto13g2754 431 PIRSF Cyclin_A_B_D_E 32 379 IPR039361 -
Sto13g2754 431 MobiDBLite consensus disorder prediction 109 153 - -
Sto13g2754 431 CDD CYCLIN 322 378 IPR013763 -
Sto13g2754 431 ProSitePatterns Cyclins signature. 226 257 IPR006671 -
Sto13g2754 431 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 379 424 - -
Sto13g2754 431 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 50 379 - -
Sto13g2754 431 CDD CYCLIN 225 314 IPR013763 -
Sto13g2754 431 SMART cyclin_7 328 408 IPR013763 -
Sto13g2754 431 SMART cyclin_7 231 315 IPR013763 -
Sto13g2754 431 PANTHER CYCLINS 50 379 IPR039361 -
Sto13g2754 431 PANTHER CYCLINS 379 424 IPR039361 -
Sto13g2754 431 SMART Cyclin_C_2 324 417 IPR004367 -
Sto13g2754 431 Gene3D - 212 315 - -
Sto13g2754 431 Gene3D - 316 380 - -
Sto13g2754 431 Gene3D - 381 423 - -
Sto13g2754 431 SUPERFAMILY Cyclin-like 189 321 IPR036915 -
Sto13g2754 431 SUPERFAMILY Cyclin-like 323 418 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2754 Sto-Chr13 33174369 33176439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2754 56 427 Core Cell Cycle Gene Families AT4G37490 49.880 6.00e-121 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2754 K21777 - gmx:547919 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2754 13 33174369 33176439 Sto13g2754 13 33174369 33176439 ECH