Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2753 ATGAGGGAGGATGACTCCAATTGGTTCCCGAGATGGGAAGAGGAACTCCCTCCTCCTGAGGAACTCATGCCTctctcccaaaccctaatcactcCTGATCTTGCTATGGCCTTCGACATCCGAGACCCCCATCACCATCAAATCCCTCAACCCCCTCCTCCTTCTTCCAATCCCTTGCCTTCTCCTTCGAATCCCACCCAACCCAACTCTGCCGATTTCGCTGACTCCGCCGAGCTGGGCTCTGGAACCGCCGGTGACGAACCCGCGCGCACCCTCAAGCGTCCTCGCCTCGTCTGGACCCCTCAACTTCACAAAAGGTTCGTTGACGCCGTCGCGCATTTGGGCATCAAAAACGCCGTGCCCAAGACCATAATGCAGCTCATGAGTGTCGACGGCTTGACCAGAGAAAACGTCGCTAGCCATTTGCAGAAATACCGTCTTTACTTGAAGCGCATGCAGGGGCTATCCTCCGGGGCTGGTGCCGGCGGCGGAGCCGCCGCAGCTGCGTTGGCTGCCTCCTCTGATCCCGCCACCGATCATCTTTTCGCTAGCGCGCCGGTGCCCGCCCATTTCCTGCACCCCACGGCTCGGCCCAATTCCGACCATTTCTTGCCGTTTGTTCCGGTTCCGGCGACTCTGcagcaccaccaccaccaccatcaccagCAGCATATGGCGGCGGCGGCCGTGGCGGCCGCCCATCCACAATTGCAGCCGCAGTATCACCGACAGGTGGGGCATTTTGGGTCACCACCTAATGGGAGCTTTGAGCATCCGTTTCTCTCAAGGCAGCCTCAAGCGCTGCATAGGATGGGAGGAGCTCCAATGCAGCACAATCCAGTGTCTGGTTATGTAGAGGATATGGAATCAGCTAACGCAGCAGGAGGGAGAAAGATTCAATCGACTATGGTGTCCATCCTGTAG 924 0.553 MREDDSNWFPRWEEELPPPEELMPLSQTLITPDLAMAFDIRDPHHHQIPQPPPPSSNPLPSPSNPTQPNSADFADSAELGSGTAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGAGAGGGAAAAALAASSDPATDHLFASAPVPAHFLHPTARPNSDHFLPFVPVPATLQHHHHHHHQQHMAAAAVAAAHPQLQPQYHRQVGHFGSPPNGSFEHPFLSRQPQALHRMGGAPMQHNPVSGYVEDMESANAAGGRKIQSTMVSIL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2753 307 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 293 - -
Sto13g2753 307 MobiDBLite consensus disorder prediction 47 65 - -
Sto13g2753 307 Gene3D - 91 153 - -
Sto13g2753 307 SUPERFAMILY Homeodomain-like 91 151 IPR009057 -
Sto13g2753 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 99 150 IPR017930 -
Sto13g2753 307 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 293 IPR044841 GO:0003700|GO:0006355
Sto13g2753 307 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 95 147 IPR006447 GO:0003677
Sto13g2753 307 Pfam Myb-like DNA-binding domain 98 146 IPR001005 -
Sto13g2753 307 MobiDBLite consensus disorder prediction 1 18 - -
Sto13g2753 307 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2753 Sto-Chr13 33169621 33170856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2753 1 299 G2-like Transcription Factor Family AT3G10760 59.654 2.03e-97 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto13g2753 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2753 - - jre:108983410 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2753 13 33169621 33170856 Sto13g2753 13 33169621 33170856 ECH