Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2747 TTGGTTGCAGGTGAAGTAATCAAAGGTTGGGACGAAGGCGTTGCCACCATGAGAAAGGGGGAAAGAGCAATCTTCAAGATTCCACCAAAGCTGGCATATGGAGACAAAGGTTCTCCACCGTTGGTTCCTCCAAATGCAACTCTCATCTTTGAGATTGAGATGCTGTCTTGGATTACCATCAGAGACTTGAGTGGTGATGGAGGAATCATGAAGAAGATAATAAGGGAAGGAGAAGGATGGGCAACTCCCAGAGATGCCGACCAGGTCTTAGTGAAATATGAAGCAAGATTAGAGAATGGGATGCTTGCTTCTGAATCTAATCAAGGTGTAGAGTTTAACATAAGTGATGGATTTCTTTGTCCTGCCATGAGTATAGCACTTAAAACAATGAGAAAGGGTGAGGAAGCAGAGCTCAGTTTAAGACTCTTATATGGTGTGAGACAAAACTCGAACAGAACCAATGAAACGGATAGTACCCTTCCAGATTCTAACATAACTAATGTCAAACTTGAGCTGGTATCATGGAAAAGTGTAATTGATGTCACAGGAGATAAGATGATACTTAAAAAGATTGAGAAAATTGGAGAGGGGTTTGAGCGCCCTAATGAAGGGTCACAAGTGAAAGTAACATATTTGAGTAAACTAGAAGATGGAACAATTATTGAGACGAAAGGATCAGAGGAAGAACCTTTTGAGTTCACAACTCAGGAAGACCAAGTACCTGAGGGGCTAGAAAGAGCAATCATGACAATGAAAAAAGGAGAGGAAGCCATAGTGACAGTCAGTGCTGAATATTTGTCTGATAGAGATGATTTACAGACAACCCCAGATAATAAAGTGCTTTATTATGAGGTCAAATTGGTTGACTTCATTAAGGAGAAGCCATTTTGGAAAATGGAGACTCAGGAGAAAATAGAAGCTGTGAAATGTATTGAGTTTGATCACTCATTTAGTGATGATGAGAAACGTCATGCTAGTACCTTACGGTTATCTTGTCTTCTGAACAATGCTGCCTGTAAACTTAAACTGGGGGACTATGCTGAAGCCTCTAGACTTTGTACTAAGGTGTTAGAACAAGATCCATTAAATGTTAAGGCTCTGTACAGAAGATGCCAAGCGTACCAGAAAACATCAGACTTAGAGAAAGCTGAGGTTGACATTAAAAGAGCTCTAGCTATTGATCCAAACAATAGAGACATGAGATCCGAGTACAAGCAGCTCAAACTTAAGCAAAAGGAATACGGTAGATATGAAGCTGACATCTTCAGCACAATGTTTTCAAGGATGAGCTAG 1293 0.4037 LVAGEVIKGWDEGVATMRKGERAIFKIPPKLAYGDKGSPPLVPPNATLIFEIEMLSWITIRDLSGDGGIMKKIIREGEGWATPRDADQVLVKYEARLENGMLASESNQGVEFNISDGFLCPAMSIALKTMRKGEEAELSLRLLYGVRQNSNRTNETDSTLPDSNITNVKLELVSWKSVIDVTGDKMILKKIEKIGEGFERPNEGSQVKVTYLSKLEDGTIIETKGSEEEPFEFTTQEDQVPEGLERAIMTMKKGEEAIVTVSAEYLSDRDDLQTTPDNKVLYYEVKLVDFIKEKPFWKMETQEKIEAVKCIEFDHSFSDDEKRHASTLRLSCLLNNAACKLKLGDYAEASRLCTKVLEQDPLNVKALYRRCQAYQKTSDLEKAEVDIKRALAIDPNNRDMRSEYKQLKLKQKEYGRYEADIFSTMFSRMS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2747 430 PANTHER PEPTIDYLPROLYL ISOMERASE 171 271 - -
Sto13g2747 430 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 58 IPR001179 GO:0003755
Sto13g2747 430 Pfam Tetratricopeptide repeat 341 402 - -
Sto13g2747 430 PANTHER PEPTIDYLPROLYL ISOMERASE 3 179 - -
Sto13g2747 430 SUPERFAMILY FKBP-like 64 151 - -
Sto13g2747 430 Gene3D - 1 59 IPR046357 GO:0003755
Sto13g2747 430 SUPERFAMILY FKBP-like 181 307 - -
Sto13g2747 430 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 82 148 IPR001179 GO:0003755
Sto13g2747 430 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 200 288 IPR001179 GO:0003755
Sto13g2747 430 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 3 55 IPR001179 GO:0003755
Sto13g2747 430 Gene3D - 60 176 IPR046357 GO:0003755
Sto13g2747 430 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 204 291 IPR001179 GO:0003755
Sto13g2747 430 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 86 176 IPR001179 GO:0003755
Sto13g2747 430 PANTHER PEPTIDYLPROLYL ISOMERASE 307 430 - -
Sto13g2747 430 SMART tpr_5 330 363 IPR019734 GO:0005515
Sto13g2747 430 SMART tpr_5 364 397 IPR019734 GO:0005515
Sto13g2747 430 ProSiteProfiles TPR repeat profile. 364 397 IPR019734 GO:0005515
Sto13g2747 430 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 171 271 - -
Sto13g2747 430 SUPERFAMILY FKBP-like 4 59 - -
Sto13g2747 430 Gene3D - 177 293 IPR046357 GO:0003755
Sto13g2747 430 Gene3D Tetratricopeptide repeat domain 294 424 IPR011990 GO:0005515
Sto13g2747 430 SUPERFAMILY TPR-like 321 426 IPR011990 GO:0005515
Sto13g2747 430 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 179 - -
Sto13g2747 430 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 307 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2747 Sto-Chr13 33115493 33117993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2747 1 429 Calmodulin-binding Proteins AT5G48570 49.784 1.32e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2747 - - gmx:100785412 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2747 13 33115493 33117993 Sto13g2747 13 33115493 33117993 ECH