Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2727 ATGAAAGGGAGTAGTGGTAGTGGAAAGAAGCAGACTGGTTTGCCGCCTTGTGCTGCGTGTAAGCTTCTGCGAAGAAGGTGTGATGAAGAATGTGTGTTTGCTCCCTATTTCCCAGCCCACTACCCTCACAAGTTCATTAATGTCCACAAATTTTACGGTGCCAGTAACGTCAACAAGATGCTTCAGGAGCTACCCGTACATCAACGAGGAGACACACACCAACTTGATGGGCTTCGGGCCCAACTGGCCCTGGCCGAGGCGGCCCACCTCAGGATGCTTCCTAGCCCAACCACTTGTGCTGCCTCGGTCTCACCACCATCGTCCAACATTTTCATGGACTCCGACTCGCATCCCCAATCTATATTTGACATGGACATGGTGATGGACCAACCCATCTATGATGATGATTCAATGTGGCCACGCTAG 426 0.5141 MKGSSGSGKKQTGLPPCAACKLLRRRCDEECVFAPYFPAHYPHKFINVHKFYGASNVNKMLQELPVHQRGDTHQLDGLRAQLALAEAAHLRMLPSPTTCAASVSPPSSNIFMDSDSHPQSIFDMDMVMDQPIYDDDSMWPR 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2727 141 ProSiteProfiles LOB domain profile. 15 124 IPR004883 -
Sto13g2727 141 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 8 72 - -
Sto13g2727 141 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 72 - -
Sto13g2727 141 Pfam Lateral organ boundaries (LOB) domain 16 73 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2727 Sto-Chr13 32995979 32996591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2727 7 72 AS2 family AT1G31320 71.212 9.54e-32 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto13g2727 LOB 2.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2727 - - pvy:116125810 140.198