Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2725 ATGGAGTTAGAGGTGAAGCTAGTGGGTAGCATAGATAACTGCTTCGTATCGCTCCCTCTTCCTCTCATCCAAATTCTGCAGGCCACACGCTCAGCGCCACTCCCTCATATTCTCGCACTCGAGCTTCGCTCTCGCACTGATGATCTCTGGGTCGTTGCTTGGTCCGGAGCCACTTCCGCTTCTGCCGCCATAGAGGTTTCCCAACAATTTGCAGAATGCATTTCCTTGCCACATCATGCTAAAGTTCAAGTAAGAGCTGCTTCTAATGTACCGCATGCTTCTCTAGTTACAATAGAACCCCATACAGAAGATGACTGGGAAATTTTGGAGCTGAACTCAGAGCAAGCTGAGGCAGAAATTTTAAACCAGCTCAGGATTGTTTACGAAGGGATGAGATTTCCTTTGTGGTTGCATGGTCACACAATGATTACATTCAATGTGGCTTCTGTTTTTCCCAAGAAGGCTGTGGTTCAACTCATGCCAGGAACTGAAGTTGCAGTTGCCCCAAAGAGACGTAAAAGAGATTTAAATTCACTTGGTGATTCGTCTCTAGACTCCTTTAATAAAGAACATACTGCAAAGATGCAGCTCCGTATACAGGATCCAGACAGGTTATGCCACACTAGTACTTATGTCAAAGAGGTTGAGCTTCAAATGGAGCTTACTACAGTTGCTCTCATTCACCCAGAAACATCCAAGCAGTTCTCATTAAATATGCTTCAGTTGGTCTCCATAGTGCCGAGAGTACCTAACAACAATGCTAATAGTACTTCCAAAACCAATATTATGAAAACAAAAGGAAGCTCAACTACTAGGGAAGTAGACACTGGAAATTTAACTGGGAAGAATGAGTCTCGACAAGCAATTGTTCATCTTTTGATTTCAGAGTCAGTTGCTAGAGGACATGTGATGGTTGCTAAGTCTCTTCGTCTTTATTTAAGAGCTGGACTGCATTCATGGGTCTATCTGAAGGCATGTAATGTTAACCTGGAAAGAGGTattcccttcttttctctttctccaTGCCACTTCAGAATGATAGGGCAGGATAATGGTGCTGAGAACCACATAGATAACAAGCTCACAAGGACTGCATCAGGTGTCTTCGTAGATACTACAGATTGGTCAATCCATAATGAAGTTATTAATGTTGTTCTGGATGAATCCCATtacaaagaagatgaagaggttGCAAATCAGTCAGAAAATAAGAAAGGATTGCAGCATCTTCTAAGATTCTGGTATATTGCACAACTTGATGCAATTACTTCCTTTACTGGTATGGAGGTTAATGCACTGGTATTGGGTAGTAAAACCTTGCTTCATTTTGAAGTAAGTTATATTAAGCTTGGGACTAATGGAAATGTTCAGTTATCTTGTAATTCATCAGAAAACAGAAAAACGACAGCtgaaatacaatttttattgaCTATTGGTGAAGATTCTCTGCATCATGGAAAACATAATGCATATGAAGTTGCTCTTGGTGAAAGAAACAAGGTGAATAGTAATCAGGAAGATCTCCAGCAGTTTAAAAATCTGAAGTTTGGTGGTCCTGTCTCCTTTCAGACTATAGAAGATATGATCTCTAAAGAACACATTAGTTCAGAAGTAACTTCCCTAGGCTGGACGGAAGCTACTGTTTCTGATGTTACAAATAGGATGATGGTATTGTTATCTTCTGCTTCTGGTACGTGGTTTGATTCTTACAACTTACCTCTCCCAGGACATGTTCTTATATATGGGCCTTCAGGCTCTGGCAAAACTTTACTAGCAAGGACTGTTGCAAAATGCCTTGAGAAACATGAAGACATCTTAGCACACAAaatttttgtttcttgctcAAAACTCTCTTTGGAGAAGGTCCCAATGATCCGAAAGGAAGTTACTAACATCATAATGGAAGCCTTAGATCATGCACCTTCTATTGTCATCTTTGACGATCTTGATAGCATAATTTCTACCTCTGATTCAGAAGGATCTCAACCCTCAATATCAGCTGCTGGACTCGCAGGTTTTCTGGTTGACATTATTGATGAATATGGGGAGAGAAGGCAAAAATCATGTGGATTTGGACCAATAGCATTCATAGCTTCTGTACAATCACTAGAGAAGATACCAAAGTCTTTGAGCTCTTCAGGGCGTTTTGACTTTCACATACAGCTACCTACTCCTGCAGCTTCAGAGCGTGGGGCTATGTTGAAGCATGAAATTCAAAGGCGTCACTTGCAATGTGGTGATGACATCCTACTTGATGTGGCTGCCAAATGTGATGGTTATGATGGATATGATCTGGAAATATTGGTGGACAGAGCTGTACATGCTGCTGTTTGCCGCTTTTTGCCTTCTAATGCTGCTCTAAATGAGCATGAGATTCCTGCTTTACTTAAGGAAGATTTCTCTCAGGCAATGCATGATTTTCTTCCTGTTGCAATGCGAGACATCACCAAATCTGCTTCTGATGGTGGGCGTTCTGGATGGGATGATGTGGGTGGTCTAGTTGACATTCGAAATGCTATCAAGGAGATGATAGAGTTGCCTTCAAAGTTTCCGAAAACCTTTGCGCAAGCTCCTTTAAGGTTACGATCAAATGTCCTTTTATATGGGCCTCCTGGTTGTGGAAAAACTCACATAGTtggtgctgctgctgctgcttgtTCACTACGGTTCATATCAGTAAAAGGGCCAGAGCTTTTAAACAAATACATTGGTGCTTCTGAACAAGCTGTTAGGGATATATTCTCCAAAGCTGCTGCTGCGGCACCATGTCTACTCTTTTTTGATGAATTTGATTCTATTGCCCCCAAGAGAGGACATGATAATACTGGAGTAACTGATCGTGTTGTAAATCAATTTCTGACAGAGTTAGATGGTGTTGAGATTTTAACTGGTGTATTTGTGTTTGCGGCAACTAGTAGACCAGATTTGCTTGATGCTGCACTTTTGAGACCAGGCAGGTTAGATCGACTTTTGTTCTGTGACTTTCCATCGTGGCATGAGAGGCTTGAAATTCTCACAGTACTTTCTAGAAAGTTACCAATGGCCAGTGATGTTGATTTGGCCGCAGTTGCTCATATGACTGAAGGATTCAGTGGAGCTGATCTCCAAGCTCTCCTTTCCGATGCTCAACTTGTAGCAGTTCATGAAGTTCTGGATAACGTAGACACCCATAGGCAAGAGAAAACACCACTTATTACGGATGCTCTTCTTAAGTTTACTGCCTCCGTGGCTAGACCATCTGTTTCCGATGAAGAGAAACGAAGACTCTACAATATTTACAGCCAGTTTCTCAATTCAAAGAGATCCGTTGCCGCTCAGTCAAGAGATGCAAAAGGCAAGAGGGCAACTCTAGCGTGA 3357 0.4063 MELEVKLVGSIDNCFVSLPLPLIQILQATRSAPLPHILALELRSRTDDLWVVAWSGATSASAAIEVSQQFAECISLPHHAKVQVRAASNVPHASLVTIEPHTEDDWEILELNSEQAEAEILNQLRIVYEGMRFPLWLHGHTMITFNVASVFPKKAVVQLMPGTEVAVAPKRRKRDLNSLGDSSLDSFNKEHTAKMQLRIQDPDRLCHTSTYVKEVELQMELTTVALIHPETSKQFSLNMLQLVSIVPRVPNNNANSTSKTNIMKTKGSSTTREVDTGNLTGKNESRQAIVHLLISESVARGHVMVAKSLRLYLRAGLHSWVYLKACNVNLERGIPFFSLSPCHFRMIGQDNGAENHIDNKLTRTASGVFVDTTDWSIHNEVINVVLDESHYKEDEEVANQSENKKGLQHLLRFWYIAQLDAITSFTGMEVNALVLGSKTLLHFEVSYIKLGTNGNVQLSCNSSENRKTTAEIQFLLTIGEDSLHHGKHNAYEVALGERNKVNSNQEDLQQFKNLKFGGPVSFQTIEDMISKEHISSEVTSLGWTEATVSDVTNRMMVLLSSASGTWFDSYNLPLPGHVLIYGPSGSGKTLLARTVAKCLEKHEDILAHKIFVSCSKLSLEKVPMIRKEVTNIIMEALDHAPSIVIFDDLDSIISTSDSEGSQPSISAAGLAGFLVDIIDEYGERRQKSCGFGPIAFIASVQSLEKIPKSLSSSGRFDFHIQLPTPAASERGAMLKHEIQRRHLQCGDDILLDVAAKCDGYDGYDLEILVDRAVHAAVCRFLPSNAALNEHEIPALLKEDFSQAMHDFLPVAMRDITKSASDGGRSGWDDVGGLVDIRNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMASDVDLAAVAHMTEGFSGADLQALLSDAQLVAVHEVLDNVDTHRQEKTPLITDALLKFTASVARPSVSDEEKRRLYNIYSQFLNSKRSVAAQSRDAKGKRATLA 1118
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2725 1118 Gene3D - 996 1075 - -
Sto13g2725 1118 PANTHER - 3 1115 - -
Sto13g2725 1118 CDD AAA 572 723 - -
Sto13g2725 1118 Pfam Peroxisome biogenesis factor 1, N-terminal 96 169 IPR015342 GO:0005524|GO:0005777|GO:0007031
Sto13g2725 1118 Gene3D - 91 170 - -
Sto13g2725 1118 SMART AAA_5 861 997 IPR003593 -
Sto13g2725 1118 SMART AAA_5 574 726 IPR003593 -
Sto13g2725 1118 PANTHER AAA-FAMILY ATPASE 3 1115 - -
Sto13g2725 1118 MobiDBLite consensus disorder prediction 254 279 - -
Sto13g2725 1118 Pfam AAA+ lid domain 1017 1055 IPR041569 -
Sto13g2725 1118 Gene3D - 826 1087 IPR027417 -
Sto13g2725 1118 Gene3D - 726 805 - -
Sto13g2725 1118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 559 804 IPR027417 -
Sto13g2725 1118 ProSitePatterns AAA-protein family signature. 965 983 IPR003960 GO:0005524|GO:0016887
Sto13g2725 1118 Pfam ATPase family associated with various cellular activities (AAA) 578 723 IPR003959 GO:0005524|GO:0016887
Sto13g2725 1118 Pfam ATPase family associated with various cellular activities (AAA) 865 992 IPR003959 GO:0005524|GO:0016887
Sto13g2725 1118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 827 1086 IPR027417 -
Sto13g2725 1118 SUPERFAMILY ADC-like 10 87 IPR009010 -
Sto13g2725 1118 Gene3D - 523 725 IPR027417 -
Sto13g2725 1118 CDD AAA 831 994 - -
Sto13g2725 1118 SUPERFAMILY Cdc48 domain 2-like 91 169 IPR029067 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto13g2725 Sto-Chr13 32978702 32991792 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2725 578 781 Calmodulin-binding Proteins AT3G56690 26.829 6.88e-08 55.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2725 K13338 - gmx:100803882 1664.05
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2725 13 32978702 32991792 Sto13g2725 13 32978702 32991792 ECH