Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto13g2725 | ATGGAGTTAGAGGTGAAGCTAGTGGGTAGCATAGATAACTGCTTCGTATCGCTCCCTCTTCCTCTCATCCAAATTCTGCAGGCCACACGCTCAGCGCCACTCCCTCATATTCTCGCACTCGAGCTTCGCTCTCGCACTGATGATCTCTGGGTCGTTGCTTGGTCCGGAGCCACTTCCGCTTCTGCCGCCATAGAGGTTTCCCAACAATTTGCAGAATGCATTTCCTTGCCACATCATGCTAAAGTTCAAGTAAGAGCTGCTTCTAATGTACCGCATGCTTCTCTAGTTACAATAGAACCCCATACAGAAGATGACTGGGAAATTTTGGAGCTGAACTCAGAGCAAGCTGAGGCAGAAATTTTAAACCAGCTCAGGATTGTTTACGAAGGGATGAGATTTCCTTTGTGGTTGCATGGTCACACAATGATTACATTCAATGTGGCTTCTGTTTTTCCCAAGAAGGCTGTGGTTCAACTCATGCCAGGAACTGAAGTTGCAGTTGCCCCAAAGAGACGTAAAAGAGATTTAAATTCACTTGGTGATTCGTCTCTAGACTCCTTTAATAAAGAACATACTGCAAAGATGCAGCTCCGTATACAGGATCCAGACAGGTTATGCCACACTAGTACTTATGTCAAAGAGGTTGAGCTTCAAATGGAGCTTACTACAGTTGCTCTCATTCACCCAGAAACATCCAAGCAGTTCTCATTAAATATGCTTCAGTTGGTCTCCATAGTGCCGAGAGTACCTAACAACAATGCTAATAGTACTTCCAAAACCAATATTATGAAAACAAAAGGAAGCTCAACTACTAGGGAAGTAGACACTGGAAATTTAACTGGGAAGAATGAGTCTCGACAAGCAATTGTTCATCTTTTGATTTCAGAGTCAGTTGCTAGAGGACATGTGATGGTTGCTAAGTCTCTTCGTCTTTATTTAAGAGCTGGACTGCATTCATGGGTCTATCTGAAGGCATGTAATGTTAACCTGGAAAGAGGTattcccttcttttctctttctccaTGCCACTTCAGAATGATAGGGCAGGATAATGGTGCTGAGAACCACATAGATAACAAGCTCACAAGGACTGCATCAGGTGTCTTCGTAGATACTACAGATTGGTCAATCCATAATGAAGTTATTAATGTTGTTCTGGATGAATCCCATtacaaagaagatgaagaggttGCAAATCAGTCAGAAAATAAGAAAGGATTGCAGCATCTTCTAAGATTCTGGTATATTGCACAACTTGATGCAATTACTTCCTTTACTGGTATGGAGGTTAATGCACTGGTATTGGGTAGTAAAACCTTGCTTCATTTTGAAGTAAGTTATATTAAGCTTGGGACTAATGGAAATGTTCAGTTATCTTGTAATTCATCAGAAAACAGAAAAACGACAGCtgaaatacaatttttattgaCTATTGGTGAAGATTCTCTGCATCATGGAAAACATAATGCATATGAAGTTGCTCTTGGTGAAAGAAACAAGGTGAATAGTAATCAGGAAGATCTCCAGCAGTTTAAAAATCTGAAGTTTGGTGGTCCTGTCTCCTTTCAGACTATAGAAGATATGATCTCTAAAGAACACATTAGTTCAGAAGTAACTTCCCTAGGCTGGACGGAAGCTACTGTTTCTGATGTTACAAATAGGATGATGGTATTGTTATCTTCTGCTTCTGGTACGTGGTTTGATTCTTACAACTTACCTCTCCCAGGACATGTTCTTATATATGGGCCTTCAGGCTCTGGCAAAACTTTACTAGCAAGGACTGTTGCAAAATGCCTTGAGAAACATGAAGACATCTTAGCACACAAaatttttgtttcttgctcAAAACTCTCTTTGGAGAAGGTCCCAATGATCCGAAAGGAAGTTACTAACATCATAATGGAAGCCTTAGATCATGCACCTTCTATTGTCATCTTTGACGATCTTGATAGCATAATTTCTACCTCTGATTCAGAAGGATCTCAACCCTCAATATCAGCTGCTGGACTCGCAGGTTTTCTGGTTGACATTATTGATGAATATGGGGAGAGAAGGCAAAAATCATGTGGATTTGGACCAATAGCATTCATAGCTTCTGTACAATCACTAGAGAAGATACCAAAGTCTTTGAGCTCTTCAGGGCGTTTTGACTTTCACATACAGCTACCTACTCCTGCAGCTTCAGAGCGTGGGGCTATGTTGAAGCATGAAATTCAAAGGCGTCACTTGCAATGTGGTGATGACATCCTACTTGATGTGGCTGCCAAATGTGATGGTTATGATGGATATGATCTGGAAATATTGGTGGACAGAGCTGTACATGCTGCTGTTTGCCGCTTTTTGCCTTCTAATGCTGCTCTAAATGAGCATGAGATTCCTGCTTTACTTAAGGAAGATTTCTCTCAGGCAATGCATGATTTTCTTCCTGTTGCAATGCGAGACATCACCAAATCTGCTTCTGATGGTGGGCGTTCTGGATGGGATGATGTGGGTGGTCTAGTTGACATTCGAAATGCTATCAAGGAGATGATAGAGTTGCCTTCAAAGTTTCCGAAAACCTTTGCGCAAGCTCCTTTAAGGTTACGATCAAATGTCCTTTTATATGGGCCTCCTGGTTGTGGAAAAACTCACATAGTtggtgctgctgctgctgcttgtTCACTACGGTTCATATCAGTAAAAGGGCCAGAGCTTTTAAACAAATACATTGGTGCTTCTGAACAAGCTGTTAGGGATATATTCTCCAAAGCTGCTGCTGCGGCACCATGTCTACTCTTTTTTGATGAATTTGATTCTATTGCCCCCAAGAGAGGACATGATAATACTGGAGTAACTGATCGTGTTGTAAATCAATTTCTGACAGAGTTAGATGGTGTTGAGATTTTAACTGGTGTATTTGTGTTTGCGGCAACTAGTAGACCAGATTTGCTTGATGCTGCACTTTTGAGACCAGGCAGGTTAGATCGACTTTTGTTCTGTGACTTTCCATCGTGGCATGAGAGGCTTGAAATTCTCACAGTACTTTCTAGAAAGTTACCAATGGCCAGTGATGTTGATTTGGCCGCAGTTGCTCATATGACTGAAGGATTCAGTGGAGCTGATCTCCAAGCTCTCCTTTCCGATGCTCAACTTGTAGCAGTTCATGAAGTTCTGGATAACGTAGACACCCATAGGCAAGAGAAAACACCACTTATTACGGATGCTCTTCTTAAGTTTACTGCCTCCGTGGCTAGACCATCTGTTTCCGATGAAGAGAAACGAAGACTCTACAATATTTACAGCCAGTTTCTCAATTCAAAGAGATCCGTTGCCGCTCAGTCAAGAGATGCAAAAGGCAAGAGGGCAACTCTAGCGTGA | 3357 | 0.4063 | MELEVKLVGSIDNCFVSLPLPLIQILQATRSAPLPHILALELRSRTDDLWVVAWSGATSASAAIEVSQQFAECISLPHHAKVQVRAASNVPHASLVTIEPHTEDDWEILELNSEQAEAEILNQLRIVYEGMRFPLWLHGHTMITFNVASVFPKKAVVQLMPGTEVAVAPKRRKRDLNSLGDSSLDSFNKEHTAKMQLRIQDPDRLCHTSTYVKEVELQMELTTVALIHPETSKQFSLNMLQLVSIVPRVPNNNANSTSKTNIMKTKGSSTTREVDTGNLTGKNESRQAIVHLLISESVARGHVMVAKSLRLYLRAGLHSWVYLKACNVNLERGIPFFSLSPCHFRMIGQDNGAENHIDNKLTRTASGVFVDTTDWSIHNEVINVVLDESHYKEDEEVANQSENKKGLQHLLRFWYIAQLDAITSFTGMEVNALVLGSKTLLHFEVSYIKLGTNGNVQLSCNSSENRKTTAEIQFLLTIGEDSLHHGKHNAYEVALGERNKVNSNQEDLQQFKNLKFGGPVSFQTIEDMISKEHISSEVTSLGWTEATVSDVTNRMMVLLSSASGTWFDSYNLPLPGHVLIYGPSGSGKTLLARTVAKCLEKHEDILAHKIFVSCSKLSLEKVPMIRKEVTNIIMEALDHAPSIVIFDDLDSIISTSDSEGSQPSISAAGLAGFLVDIIDEYGERRQKSCGFGPIAFIASVQSLEKIPKSLSSSGRFDFHIQLPTPAASERGAMLKHEIQRRHLQCGDDILLDVAAKCDGYDGYDLEILVDRAVHAAVCRFLPSNAALNEHEIPALLKEDFSQAMHDFLPVAMRDITKSASDGGRSGWDDVGGLVDIRNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMASDVDLAAVAHMTEGFSGADLQALLSDAQLVAVHEVLDNVDTHRQEKTPLITDALLKFTASVARPSVSDEEKRRLYNIYSQFLNSKRSVAAQSRDAKGKRATLA | 1118 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto13g2725 | 1118 | Gene3D | - | 996 | 1075 | - | - | |
Sto13g2725 | 1118 | PANTHER | - | 3 | 1115 | - | - | |
Sto13g2725 | 1118 | CDD | AAA | 572 | 723 | - | - | |
Sto13g2725 | 1118 | Pfam | Peroxisome biogenesis factor 1, N-terminal | 96 | 169 | IPR015342 | GO:0005524|GO:0005777|GO:0007031 | |
Sto13g2725 | 1118 | Gene3D | - | 91 | 170 | - | - | |
Sto13g2725 | 1118 | SMART | AAA_5 | 861 | 997 | IPR003593 | - | |
Sto13g2725 | 1118 | SMART | AAA_5 | 574 | 726 | IPR003593 | - | |
Sto13g2725 | 1118 | PANTHER | AAA-FAMILY ATPASE | 3 | 1115 | - | - | |
Sto13g2725 | 1118 | MobiDBLite | consensus disorder prediction | 254 | 279 | - | - | |
Sto13g2725 | 1118 | Pfam | AAA+ lid domain | 1017 | 1055 | IPR041569 | - | |
Sto13g2725 | 1118 | Gene3D | - | 826 | 1087 | IPR027417 | - | |
Sto13g2725 | 1118 | Gene3D | - | 726 | 805 | - | - | |
Sto13g2725 | 1118 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 559 | 804 | IPR027417 | - | |
Sto13g2725 | 1118 | ProSitePatterns | AAA-protein family signature. | 965 | 983 | IPR003960 | GO:0005524|GO:0016887 | |
Sto13g2725 | 1118 | Pfam | ATPase family associated with various cellular activities (AAA) | 578 | 723 | IPR003959 | GO:0005524|GO:0016887 | |
Sto13g2725 | 1118 | Pfam | ATPase family associated with various cellular activities (AAA) | 865 | 992 | IPR003959 | GO:0005524|GO:0016887 | |
Sto13g2725 | 1118 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 827 | 1086 | IPR027417 | - | |
Sto13g2725 | 1118 | SUPERFAMILY | ADC-like | 10 | 87 | IPR009010 | - | |
Sto13g2725 | 1118 | Gene3D | - | 523 | 725 | IPR027417 | - | |
Sto13g2725 | 1118 | CDD | AAA | 831 | 994 | - | - | |
Sto13g2725 | 1118 | SUPERFAMILY | Cdc48 domain 2-like | 91 | 169 | IPR029067 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto13g2725 | Sto-Chr13 | 32978702 | 32991792 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto13g2725 | 578 | 781 | Calmodulin-binding Proteins | AT3G56690 | 26.829 | 6.88e-08 | 55.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto13g2725 | K13338 | - | gmx:100803882 | 1664.05 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Sto13g2725 | 13 | 32978702 | 32991792 | Sto13g2725 | 13 | 32978702 | 32991792 | ECH |