Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2669 ctgagagaGGCATTGGATCCAGTGTCACCGGCACTGCAAACTCCCTCCGTTTCCGGCATCGAACCTCGCTGTCAACTCAGAGCTTGTTTCATGGAACAGTACGAGAAAGTTgagaagataggtgaaggtacCTATGGGGTGGTTTACAAGGCTCGTGATCGGGTCACTAATGAGACAATAGCATTGAAGAAAATTCGGCTGGAGCAGGAAGATGAGGGCGTGCCTAGCACTGCGATTCGAGAGATTTCCCTTTTGAAAGAAATGCAGCATAGGAACATTGTTAGGTTGCAGGATGTAGTGCACAGCGAGAAGCGTTTGTATCTGGTTTTTGAGTACCTGGACTTAGATCTGAAGAAGCACATGGATTCATCTCCTGATTTTGCAAAAGATCCACGACAAGTAAAGATGTTTCTCTACCAAATTCTCTGTGGCATTGCTTACTGTCATTCGCATAGAGTTCTTCATCGGGACTTGAAACCACAGAACTTGTTGATAGACCGCCGCAGTAATTCACTAAAGCTTGCAGATTTTGGATTGGCTAGGGCATTTGGTATTCCTGTCAGGACATTTACACACGAGGTGGTGACATTATGGTACAGAGCTCCAGAGATATTGCTTGGATCTCGCCAGTATTCAACCCCTGTCGATGTTTGGTCGGTGGGCTGTATATTTGCAGAGATGGTAAACCAGCGACCACTATTTCCTGGAGACTCTGAGATTGATGAACTGTTCAAAATATTCAGAATCATGGGTACGCCAAATGATGATACATGGCCTGGTGTGACTTCATTGCCTGATTTTAAATCAGCCTTTCCCAAGTGGCCTCCTAAGGACCTAGCAACTGTGGTTCCAAATCTTGAGCCAGCTGGCATTGATCTTCTTTCTATTCAAACTGAGTGTGATCATATTGCCTTCTTCATGTCTAAGGATTTCATACATACACTAGGCAAATTTCCAGTCTGCTTGAATGTGATAGTGCTGGATGACCAGCAAGATCACAAGGTAACCGCGGATCGTCCTTGTAGGAGGACACTTCAGACTCTAACTTCTTCAGATCTCGGTATCCGAATGCCGCTTCCCGTAATGTGTCAGCTTTCTTCTCTGGCCAATCAAAATGCTTTAGGACTGCCCTCTCATCCACCTATGATTGATTTTGATTGA 1161 0.4401 LREALDPVSPALQTPSVSGIEPRCQLRACFMEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRSNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRIMGTPNDDTWPGVTSLPDFKSAFPKWPPKDLATVVPNLEPAGIDLLSIQTECDHIAFFMSKDFIHTLGKFPVCLNVIVLDDQQDHKVTADRPCRRTLQTLTSSDLGIRMPLPVMCQLSSLANQNALGLPSHPPMIDFD 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2669 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Sto13g2669 386 SMART serkin_6 34 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2669 386 PANTHER CELL DIVISION PROTEIN KINASE 32 301 - -
Sto13g2669 386 Gene3D Phosphorylase Kinase; domain 1 31 114 - -
Sto13g2669 386 Gene3D Transferase(Phosphotransferase) domain 1 116 302 - -
Sto13g2669 386 PANTHER - 32 301 - -
Sto13g2669 386 Pfam Protein kinase domain 34 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2669 386 SUPERFAMILY Protein kinase-like (PK-like) 28 296 IPR011009 -
Sto13g2669 386 CDD STKc_CDK1_CdkB_like 34 295 - -
Sto13g2669 386 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Sto13g2669 386 ProSiteProfiles Protein kinase domain profile. 34 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2669 Sto-Chr13 32488310 32495799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2669 31 295 Core Cell Cycle Gene Families AT3G48750 87.925 1.92e-177 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Sto13g2669 Pkinase 2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2669 K02206 - gmx:100127418 519.235