Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2668 ATGGATTCCACAAAGAATTGGTTTAAGAAATTCCAGATCAAATCAAGAAAACGGCCCGATGACAAAAAGGATATTGGAAATGGAAAGAATGCAGACAAACCCATTGGACCACTTTCAACTGAGACAAAGCAGAAGGTTGCAGCTGCAAAGCAGTATATTGAAAACCATTATCAATCGCGAATGAAGTCTTTGCAAGACAGGAAGGAAAGGAATTGGATTAGACATAGCCTGTTAATCAATTACCATATGAAAGTAGATAATAAATCAGGAGAAAGGAAAAAGATTCAGTTTGGTAGAGGACAAGATATACCTAAAAGTTCatattgtttgcAAGATTTTGTGCTTGCTATACTGTGGAGTGATTTTGAAGGTGTTGCACCACATTATAGGCGATGGATTTTAGAGAGGAAGCTTGCTGATGCTGATGTTCCTGAGGATGAGCAAATGGATATTCTGAAAAACTTTGAGAAAAATGAGACAGAATATATGCGCATTCAAAGGCATAAGATAGGAGTTgatgattttgaacttttgaccATCATAGGAAGGGGTGCATTTGGGGAGGTAAGACTGTGCAGAGAAAAAGGTAGCGGTAATGTGTATGCTATGAAGAAGCTGAAGAAATCTGAGATGCTCCGCAGAGGCCAGGTTGAACATGTTAGAGCTGAAAGAGATCTTCTTGCTAAAGTTAATAGTGCTTACATTGTGAAGCTGTACTGCTCCTTTCAAGATGATGAATTTTTGTACCTTATAATGGAATTCCTTTCTGGTGGAGACATGATGACATTACTTATCCGCAAAGAAATTTTGACTGAGAATGAGGCTCGGTTTTATGTAGCAGAGGCCATACTTGCTATTGAATCTATCCACAGACACAACTACATACACAGGGATATCAAGCCTGACAATTTACTGCTTGATCGTGATGGCCATTTGAAGCTTTCAGATTTTGGGTTGTGTAAACCATTGCACAGTAGTAATTTCCCAAATTTGGGTGAGAATCACCCTGGGCCAGGAAGGAGCTATAAATCTTATATGGATCAAAATAGTGATTGTGACCCATCACATGTTGCATCAAGGCGGACGCAGCAGGACCAGTTACTACACTGGCAAAAGAACAGGCCAGTAAAAGTTAAGTTGGCTACTGGTTTGGTTGCCATGTTGGTAGAGGTGTTGGAATCAGGTTTTAAGCTTTTTATTAACGTATTGGGTTCTGTCATCCAGGCTTATTCAACAGTAGGAACACCAGACTACATTGCCCCTGAGGTACTGCAGAAGAAAGGCTATGGAATGGAGTGTGATTGGTGGTCTCTTGGTGCAATTATGTATGAGATGCTTGTGGGATATCCACCCTTTTACTCTGAAGATCCTATGTCAACTTGCAGGAAGATAATAAACTGGAGAAACTATCTGAAGTTCCCTGATGGAGCAAAGTTGTCCACTGAGGCTAAAGATCTCATTTGCAGGCTATTATGTAATGTGGAGCAGAGGCTTGGGACTAAAGGAGCTCATGAAATTAAGGCACATCCGTGGTTCAGAAGTTTGCAATGGGATAGATTATATCAGATGGAAGCTGCTTTTATTCCAGACGTCAATGATGATTTGGACACTCAGAATTTTGAGAAGTTTTCAGAGATGCTTTCTTCTACTGATACAAATTTTGTTGGTTACACATATAAGAACTTGGAGATTGTCAATCAGCATGATACTTCTGGCATCGCTGAACTGAGGAAAAAGACTTCCAAGCCCAAGAGACCTTCTATCAAATCATTATTTGATACTCCAGATCTTTCTGATCCACCTGTTTTGGGGAGCTTTCTCAACATTTTGCCGACCCACTCAGAAGTTTCAGAAAGTTCCGAGCCATCATCTCCATCCTCTACGAAAGTGCATCGTCAACGCAAAGCTCTTTGA 1914 0.3981 MDSTKNWFKKFQIKSRKRPDDKKDIGNGKNADKPIGPLSTETKQKVAAAKQYIENHYQSRMKSLQDRKERNWIRHSLLINYHMKVDNKSGERKKIQFGRGQDIPKSSYCLQDFVLAILWSDFEGVAPHYRRWILERKLADADVPEDEQMDILKNFEKNETEYMRIQRHKIGVDDFELLTIIGRGAFGEVRLCREKGSGNVYAMKKLKKSEMLRRGQVEHVRAERDLLAKVNSAYIVKLYCSFQDDEFLYLIMEFLSGGDMMTLLIRKEILTENEARFYVAEAILAIESIHRHNYIHRDIKPDNLLLDRDGHLKLSDFGLCKPLHSSNFPNLGENHPGPGRSYKSYMDQNSDCDPSHVASRRTQQDQLLHWQKNRPVKVKLATGLVAMLVEVLESGFKLFINVLGSVIQAYSTVGTPDYIAPEVLQKKGYGMECDWWSLGAIMYEMLVGYPPFYSEDPMSTCRKIINWRNYLKFPDGAKLSTEAKDLICRLLCNVEQRLGTKGAHEIKAHPWFRSLQWDRLYQMEAAFIPDVNDDLDTQNFEKFSEMLSSTDTNFVGYTYKNLEIVNQHDTSGIAELRKKTSKPKRPSIKSLFDTPDLSDPPVLGSFLNILPTHSEVSESSEPSSPSSTKVHRQRKAL 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2668 637 CDD STKc_NDR_like 173 560 - -
Sto13g2668 637 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 407 598 - -
Sto13g2668 637 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 131 339 - -
Sto13g2668 637 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 30 70 - -
Sto13g2668 637 ProSitePatterns Protein kinases ATP-binding region signature. 181 204 IPR017441 GO:0005524
Sto13g2668 637 SMART serkin_6 175 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2668 637 MobiDBLite consensus disorder prediction 610 631 - -
Sto13g2668 637 MobiDBLite consensus disorder prediction 576 637 - -
Sto13g2668 637 SUPERFAMILY Protein kinase-like (PK-like) 158 557 IPR011009 -
Sto13g2668 637 ProSiteProfiles Protein kinase domain profile. 175 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2668 637 MobiDBLite consensus disorder prediction 1 41 - -
Sto13g2668 637 ProSiteProfiles AGC-kinase C-terminal domain profile. 513 569 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto13g2668 637 SMART pkinase_C_6 513 561 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto13g2668 637 PANTHER SERINE/THREONINE-PROTEIN KINASE 131 339 - -
Sto13g2668 637 PANTHER SERINE/THREONINE-PROTEIN KINASE 407 598 - -
Sto13g2668 637 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 70 - -
Sto13g2668 637 Pfam Protein kinase domain 409 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2668 637 Pfam Protein kinase domain 176 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2668 637 Gene3D Phosphorylase Kinase; domain 1 166 260 - -
Sto13g2668 637 Gene3D Transferase(Phosphotransferase) domain 1 261 529 - -
Sto13g2668 637 MobiDBLite consensus disorder prediction 1 29 - -
Sto13g2668 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2668 Sto-Chr13 32471435 32481413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2668 38 70 AGC Kinase Gene Family AT4G14350 69.697 3.71e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Sto13g2668 Pkinase 2.3e-42 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2668 13 32471435 32481413 Sto13g2668 13 32471435 32481413 ECH