Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2667 AtgtgcagcagcagcagcatcaTCTTCGGCCCAATCATGGATAACTATCATCAAGGCGATTTAACTGACATCATCCGTGCAACTGCAACTACTactggaggaggaggaggagaagccgCACTAGGAACCACTACTTGTTCTTCTGATCAAttccttcctcctcctcctcatcatcaagctttcaatttctcttccctCATGGAAGATCCTAGAACCATCATCACCCAGCAGCAGGGCTTCGGCGATCCCTTCTCCAACATGCGAGATCCCTTCCTCCAAGATCTCGATTTCCCTCCCAATACTAATACCAATTACTTcccccctcctcctccttcctCCTCTTTAGTACTCCACCACCATGACAATAACGCCATATTCTCTAATAACATCATTCAAATCTCTCCGCCTCCCAATAATGCCAACTTGCCCGTATCGCCGCCCTCTCCCGCCCCCGGAATTAAGAGTGTGgtcaacaataataatagcAGAGAGTGCCTTGTGGACAACGCAGCGGGAGTGCAGATCTCATCCCCAAGGAATCCGCCTCTTAAGCGAAGGAAGAGCCAAGCGAAGAAGGTGGTTTGTATTCCTGCACCGGCAGCTGCAAATAGCAGGCCAAGCAGTGGAGAAGTGGTTCCTTCTGATTTGTGGGCTTGGAGGAAGTACGGTCAGAAACCCATCAAAGGTTCTCCTTATCCAAGGGGTTACTATAGATGCAGCAGCTCCAAGGGTTGTTCAGCAAGGAAACAAGTAGAGAGGAGCAGGACAGACCCAAACATGTTGGTCATAACCTACACTTCAGAGCACAACCACCCATGGCCTACTCAAAGAAACGCTCTTGCTGGCTCAACCAGGTCTCAGCCATCGTCCAAGAACAACAATAATGCTGCTTCTTCAAAGAACAACAATTCTGAAGCCTCATTAAGTCAGGCCCAAAAGCCAAAGGAAGAAGATAATAAGAGTAGTGACATGATGACGAGCAAGATAGTGAAGGAGGAGATGGAAGATACAGTACTGGAGAAGCATGATGTTGATCAGCTTGAGACTGAGCTTGAGCTTGAGCTTGAGCTTgagaataatattattatgGAAGATAATCATGATAATATTAACAATAATGGAGAATTCAGTGACGGAGTACTGCCTTACAAGCCATCCATGGTGGAGTGTAATAATAATCAAAGTGATCAGGATTTCTTTGCAGAATTGGGAGAGATTGAAGCTGACCCACTCAATGATCTCTTGTTCACTCATCAACACTTCAATCAGCAGCAACACCAGAGAGAATCCAAGGCCTTAGATCCTTTCCATCTCTTTGACTGGTCAGGAGATCACAACAATATTAACACCTCCTCATTTCAAGAACCTCCAAAGAGATCAGGGTTATAA 1389 0.4096 MCSSSSIIFGPIMDNYHQGDLTDIIRATATTTGGGGGEAALGTTTCSSDQFLPPPPHHQAFNFSSLMEDPRTIITQQQGFGDPFSNMRDPFLQDLDFPPNTNTNYFPPPPPSSSLVLHHHDNNAIFSNNIIQISPPPNNANLPVSPPSPAPGIKSVVNNNNSRECLVDNAAGVQISSPRNPPLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSSKNNNNAASSKNNNSEASLSQAQKPKEEDNKSSDMMTSKIVKEEMEDTVLEKHDVDQLETELELELELENNIIMEDNHDNINNNGEFSDGVLPYKPSMVECNNNQSDQDFFAELGEIEADPLNDLLFTHQHFNQQQHQRESKALDPFHLFDWSGDHNNINTSSFQEPPKRSGL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2667 462 MobiDBLite consensus disorder prediction 257 310 - -
Sto13g2667 462 ProSiteProfiles WRKY domain profile. 208 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g2667 462 Pfam WRKY DNA -binding domain 215 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g2667 462 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 18 444 IPR044810 GO:0003700
Sto13g2667 462 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 18 444 - -
Sto13g2667 462 SMART WRKY_cls 213 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g2667 462 SUPERFAMILY WRKY DNA-binding domain 211 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g2667 462 MobiDBLite consensus disorder prediction 238 324 - -
Sto13g2667 462 Gene3D WRKY domain 186 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2667 Sto-Chr13 32450872 32453766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2667 1 446 WRKY Transcription Factor Family AT1G30650 42.647 1.68e-81 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto13g2667 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2667 - - aprc:113852911 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2667 13 32450872 32453766 Sto13g2667 13 32450872 32453766 ECH