Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2658 ATGGACTCAAAACTTAGTGCTAGAGCTCCCTCAAAACAGCATCAGAAGACGGCTGGGATACAAACAGGAGAGGCAAAAGACATCAGGCCTCCTCCACCCGTGGTTTCAGAACTGGCTGCCTCAGAAAGTTTATCGAAATCTGTGCAAAATACCCCAAAGCAGAATACTGGAGAAACATCTGAAAACAAGAAGTTGGGAATTTCAAACCAAAAGGGGCTTGCTGATTCCTTGGTCAATAAAAGTGGTTCTGGTGCTTCCTCATCTGTTCTCGAGCGAGCGTCTGGTGAAGTTGACCATggtaataatgaaaatagaggCTCGCAAGATAGCTCAATAGATCAGGAAAAGAAGACATCAGAGTATGGAAGTGTGAAGAACAGTTCTGTTTCAGCAAAATTTAGTGATGGGGCAAGCAGTTTTGGAAAAACCAGTGTAAGTGCTAAGATTAGTGATCGAGCTGATTATGTTGAGAGTGGAAAGAGCAGTATCTGCCGTGGAAGCACAAGCAGTGATGTCAGTGATGAGAGCACCTGTAGCAGCTTTAGTAGCAGCATAAGCAAACCTCACAAAGCAAATGACTTGAGATGGGAAGCCATCCAAGCTGTCCGAGCTAAAGATGGGGTGCTGGGTTTAGGTCACTTTAGACTACTGAAGAGGTTGGGCTGTGGGGATATTGGGAGTGTGTATCTCTCGGAGTTGAGTGGAACTAAATGCTATTTTGCAATGAAGGTAATGGACAAAGGGTCGCTAGCAAGTAGAAAGAAGCTGCTTCGTGCTCAGACTGAAAGGGAAATACTGCAGTCACTGGACCATCCTTTTCTCCCAACATTGTATACCCATTTTGAGACTGAGAAGTTCTCATGCTTGCTAATGGAATTCTGCCCTGGTGGAGACTTACACACACTTAGGCAGAAACAGCCTGGGAAGCACTTTCCTGAGCAGGCAGTAAAATTTTATGTGGCAGAAGTTCTGCTGGCTCTAGAATACCTTCACATGCTTGGAATTGTCTATCGTGACCTCAAGCCGGAAAATGTCCTTGTGAGGGATGATGGACATATTATGCTCTCTGACTTTGATCTTTCCCTCAGATGTGCTGTTAGTCCAACACTCGTTAAATCCTCATCAATGGATTCTGAGCCTTTAAGAAAGAATCCTGTTTATTGTGTCCAGCCAGCTTGTATTGAGCCACCTTCCTGCATCCAGCCATCTTGTGTTGCTCCTACGACATGCTTTTCACCCCGGTTCTTTTCAAGCAAATCAAAGAAAGATCGGAAACCAAAGACAGAAATTGGAAATCAAGTGAGTCCTTTACCTGAGCTCATTGCGGAGCCGACTGATGCACGATCTATGTCATTTGTTGGAACCCATGAGTACTTGGCACCTGAGATTATCAAGGGTGAAGGTCATGGGAGTGCGGTTGATTGGTGGACTTTTGGAATCTTTCTATATGAACTGTTGTTTGGTAAAACTCCTTTTAAGGGGTCTGGGAATCGAGCTACACTGTTTAATGTTGTAGGGCAGCCTCTCCGTTTTCCAGAAGCACCTGTCGTAAGTTTTGCAGCGAGAGATCTTATTAGAGGTTTGCTTGTGAAGGAACCACAGCACCGATTGGCCTACAAACGTGGGGCTACTGAGATTAAGCAACATCCCTTCTTCGAAGGTGTGAATTGGGCATTGATCCGTTGTGCTACCCCACCTGAGATCCCCAAGCCTGTAGAATATGAGAAGATCCCCTCCCCAGCATCTTCAGGCAGTGAAAAGGTTGTTAAGAATATGTCAATTCCTGATCAGAAAGGCTCTGACAATTATCTTGAATTTGATTTCTTCTAG 1830 0.4448 MDSKLSARAPSKQHQKTAGIQTGEAKDIRPPPPVVSELAASESLSKSVQNTPKQNTGETSENKKLGISNQKGLADSLVNKSGSGASSSVLERASGEVDHGNNENRGSQDSSIDQEKKTSEYGSVKNSSVSAKFSDGASSFGKTSVSAKISDRADYVESGKSSICRGSTSSDVSDESTCSSFSSSISKPHKANDLRWEAIQAVRAKDGVLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLLMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSSMDSEPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRFFSSKSKKDRKPKTEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEYEKIPSPASSGSEKVVKNMSIPDQKGSDNYLEFDFF 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2658 609 MobiDBLite consensus disorder prediction 96 120 - -
Sto13g2658 609 Pfam Protein kinase domain 215 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2658 609 Pfam Protein kinase domain 449 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2658 609 CDD STKc_phototropin_like 213 571 - -
Sto13g2658 609 SMART serkin_6 214 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2658 609 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 4 609 - -
Sto13g2658 609 Gene3D Transferase(Phosphotransferase) domain 1 298 365 - -
Sto13g2658 609 PANTHER FLIPPASE KINASE 1-RELATED 4 609 - -
Sto13g2658 609 ProSiteProfiles Protein kinase domain profile. 214 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2658 609 MobiDBLite consensus disorder prediction 584 598 - -
Sto13g2658 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672|GO:0006468
Sto13g2658 609 MobiDBLite consensus disorder prediction 574 601 - -
Sto13g2658 609 SUPERFAMILY Protein kinase-like (PK-like) 190 578 IPR011009 -
Sto13g2658 609 MobiDBLite consensus disorder prediction 1 127 - -
Sto13g2658 609 MobiDBLite consensus disorder prediction 40 90 - -
Sto13g2658 609 Gene3D Phosphorylase Kinase; domain 1 212 297 - -
Sto13g2658 609 Gene3D Transferase(Phosphotransferase) domain 1 446 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2658 Sto-Chr13 32368661 32386869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2658 61 609 AGC Kinase Gene Family AT5G47750 79.310 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sto13g2658 Pkinase 6.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2658 K08286 - gmx:100781600 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2658 13 32368661 32386869 Sto13g2658 13 32368661 32386869 ECH