Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2637 ATGACGTCTATTCCGTCAAAAAACCTGTGGATTCGACGGCAACAATGCCCATGTGGAGATTGGAAATGTTATATAACATATGAGGGCGATGCGGAGGAGAATTCAGCAGGCCCGGAATTGGTGAAGACAGAGAAGGCTGCATCAGAAGCTATGGTTTCCCCCTATGTTGGAATGGTGTTTAAGAGTGATGATGATGCATTTGAGTATTATGGGAATTTTGCCAGGAAAAATGGATTCTCTGTTAGGAAAGAAAGATCAAGACTTAGCCCACAGTTGGGAATTTATAAACGTGACTTTGTTTGTTACCGTTCCGGGTTTGCCCCGGTGAAGAAAAAGCCTAATGGAGAACACCATAGAGATAGGAAATCGGTGCGGTGTGGATGTGATGCAAAAATGTATCTGTCTAAGGAGATAGTAGAGGGAGTTTCCCAATGGTTTGTTGTGCAATTCAGCAATGTACATAATCATGAGCTCTTGGAAGATGACCAGGTGCGCCTTCTACCGGCGTATCGTAAAATTCAAGAGGCTGATCAAGAGCGGATACTCTTACTTTCTAAAGCCGGGTTTCCAATACATCGGATAGTGAAGATGCTTGAGCTGGAAAAAGGGATTCAAGGTGGGCAACTGCCTTTCTTGGAAAGGGATGTGAGGAATTTTGTTCAAAACCGTAAGAAGGTTGTTCAGGAAAATGAGGCGTTACTCagtgagaaaagagaaaatgataCATTGGAACTTCTTGAGGCATGCAAAGCTATGAAAGAGAACAATGATGACTTTGTTTATGATTTTACAGTGGATGAGAATGAAAAGGTTGAAAACATTGCTTGGTCATATGGTGATTCTGTTCATGCGTATGCCATGTTTGGTGATGTGGTTTATTTTGACACTACTTATCGATCAATAACATATGGATTGCTCTTTGGAGCATGGTTTGGGATTGACAACTGTGGTAGAACTATTTTCTTTGGTTGTGTTTTATTGCAGGATGAAACATCCCGATCCTTCTCATGGGCATTGCAGACTTTTGTCCGACTCATGAGAGGAAGATGTCCACAAACAATTTTAACTGATCTCGACCCAGGGCTTAGAGATGCTATAAGGACCGAATTGCCTAGCACTAAACATGTGATTTCTACATGGAACATAATGCCCAAGGTACCCTGCTGGTTTTCTCTTCCACTTGGGTCTCGCTATGAAGAATTCAAATCTGAGTTCGATGCATTATTTCACATTGAGAATACAGAGGAATTTGAGCTACGATGGAACCAAATGGCATCTGCGTTTGGACTTGGTTCAGATAAGCATATTGGTCTACTGTATTCCATGCGGGCATCTTGGGCGCTATCCTACGTGAGGGGCTTCTTTCTGGCTCGGATGGTGACAACATCTTACTCAAAGTCTATAGATGGGTTTTTGAAAGGGATCTTCAGTTCACAAACGTGTTTGCGTAGCTTTTTTGAGCAGGTTGGCATTTCTGCAAATTTTCAGCATCATCATGCACGTCCGGAGACTcaatatatacatctaaaaagTTGCATACCCATTGAAGAACATGCACGGAGTATTTACACACCTTTTGCCTTTAATGCCTTGCAACAAGAATTATTACTGGCAATGCAATATGCTACATCTGAAATGGCCAATGGGTCATATATTGTACGCCACTTCAAAAGGATAGATGGTGAGCGGCTTGTGATATGGTTAGCTGAGGATGAACAGATCCATTGCTCTTGCAAGGAATTTGAATCCTCGGGGATATTATGCAGACACGCTCTTCGTGTATTTGTAATAAAGAATTATTTTCAGCTGCCAGACAAGTATTATCTAAGTAGATGGCGACAGGAGTCCTCTTTAATTCTTAACCAAGATCATAATCACTGTATTGATGATGAATGGTTTCAAGAATATCAGTCCCTTGCTGAAACTTTGTTTGCAGAATCCTCAATTACAAAGGAGCGATCTGACTATGTTCGTAGAGAACTGACAAGCGAAATTACTAGGATTCTTAGTGAGGTTAGAAATCTGCCAGAGACCAATGGAGTCTCCATGGACTTGACTGTTTCACCAACCAGTTAG 2076 0.4104 MTSIPSKNLWIRRQQCPCGDWKCYITYEGDAEENSAGPELVKTEKAASEAMVSPYVGMVFKSDDDAFEYYGNFARKNGFSVRKERSRLSPQLGIYKRDFVCYRSGFAPVKKKPNGEHHRDRKSVRCGCDAKMYLSKEIVEGVSQWFVVQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVVQENEALLSEKRENDTLELLEACKAMKENNDDFVYDFTVDENEKVENIAWSYGDSVHAYAMFGDVVYFDTTYRSITYGLLFGAWFGIDNCGRTIFFGCVLLQDETSRSFSWALQTFVRLMRGRCPQTILTDLDPGLRDAIRTELPSTKHVISTWNIMPKVPCWFSLPLGSRYEEFKSEFDALFHIENTEEFELRWNQMASAFGLGSDKHIGLLYSMRASWALSYVRGFFLARMVTTSYSKSIDGFLKGIFSSQTCLRSFFEQVGISANFQHHHARPETQYIHLKSCIPIEEHARSIYTPFAFNALQQELLLAMQYATSEMANGSYIVRHFKRIDGERLVIWLAEDEQIHCSCKEFESSGILCRHALRVFVIKNYFQLPDKYYLSRWRQESSLILNQDHNHCIDDEWFQEYQSLAETLFAESSITKERSDYVRRELTSEITRILSEVRNLPETNGVSMDLTVSPTS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2637 691 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Sto13g2637 691 ProSiteProfiles Zinc finger SWIM-type profile. 564 599 IPR007527 GO:0008270
Sto13g2637 691 Pfam SWIM zinc finger 571 595 IPR007527 GO:0008270
Sto13g2637 691 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 27 681 - -
Sto13g2637 691 Pfam MULE transposase domain 291 383 IPR018289 -
Sto13g2637 691 SMART 26again6 574 601 IPR006564 GO:0008270
Sto13g2637 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 681 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2637 Sto-Chr13 32234651 32236897 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto13g2637 MULE 1.5e-16 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2637 - - gmx:100817107 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2637 13 32234651 32236897 Sto13g2637 13 32234651 32236897 ECH