Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2633 ATGTCTGAGACTTCTCCCGTTTTTGTGGAGTGGGAGGAGCAAATTATATGCCAGGAGCGGGGGAATCGTGTGACTCACTTCTACTTGAAGGATGCATCTGGGAATTCGGTGCTTGCTGTAGTGGGGACTGAGAGGAGTATAAGGCATATGATGTATGTTGTCTCTGACGAATTTTTGCAGGTTTATGGGGCCAAAGATACCATTTCTACGTGTAAATGGCGGGCAAGGAGAGAGGTGGTAGACTGGCTCACATATTTGGTCTCAAGGAGCAGTCAACAACATTTAGATGATTTGAGTGTACTGATGAATGATTCAGCACATGCTGTAGAACCTCTCGATGTACTAGCAGCTGGAATCGGtgccaataaaaaatatttacctGACAAAATGGTTTCAAGGAAATTGAAATTTCAAAGTTCAGATATTGAATGGTCAGGCGCTGCTTGGTTTTGTGCTAAACAGCTTAAGCACTACTCAGGATTTTTTAGGAATGGGACTACCATATAtGTTCATTCATTTGTATATCTTATGGCTGAAGAAGAAATTCACTATCTTGGTTACTTGGAAGATATGTACGAAGACAAGAAGGGACAAAAAAAGGTCAAAGTAAGATGGTTTCACCATGGTCAGGAAGTGAAGCGTGTGATCCCACAGCTGAATCTGCAACCAGGAGAAGTTTTCATCACACCTCATGTTCAAGTGATCAGTGCCGAATGTGTCAATGGTCCTGCAGCGGTTTTGAGTCCTAAGCATTATGAGAAATGCTTGAGTGCTATGCCACATACCTCTTCAGCTGAGGTCCATGTTTGCTCTAGgcagtttaaaaataataagcttAAGCCCTTCTCTGTTACTAAGTTGCGTGGGTATGGTAACCAATCTGTGCTCTCCTGTTTAAATAGTCCTATCCTATCAAAGAGAAAGGCCAAGAGTCAGAAATTGCAcagagaagatgatgaagacTTCTCTCAAGAAGATCATTTAAGGCCCAGcaataagagaaataaaacTTCTAAGGGGCATCAAGTACTTGGAAAATGTTCTTCTGGTCTGCAAAACGTTGCTAATAAGAATGAGATGAAAAAATGTGAACCAGCATACCCTAGGTTAAAATTAAGACTATCAAGAAAAACAATGGGCATTAAGGTTATTGGTCCTAAGCCCCAGAGTCATCTGTCTTTCCAGGTTGGTGAAAAGATAGAGATTCTGTGTCAAGATAGTGGCATTAGAGGATGCTGGTTTAGATGTAAAATCTTATATGTATCCCAGAAGCAGATAAAGGTCCAGTATGATGATGTAGTGGATGTAGATGGACTGGGGAAACTGGAGGAATGGGTCCCTGCATCTAGAGTGGCAGCTCCTGATAAACTGGGTATACGATGTTCAGGCCGCTTAACAGTACGGCCATGCCCTCCTGAAGATACTGTGGACCGTACTCTTGAGATTGGAGCATCTGTGGATGCCTGGTGGAGTGATGGATGGTGGGAAGGTGTCATAACTGCCATTGATGTTTGTGGAGTTGATACCTTGCAGGTTTATTCTCCAGGTGAAGGGAAGTTCCTTGATCTTGAGAAGAAGGATGTCCGGATTTCGCGAGATTGGGTTGGTAACAGGTGGGTTGATTTACAGGGAAAGCCTGATATTTGCAGCTTCTTATCTTCAAATGTTGCTCCCAGCATCAAGCCAGCAGCTCATTCCGATGTGGCAGATGGGCCTGTGTCTGATTTCTCTGCAATACTGGAGAGTAAATTTTTGTTGATTCCTGAAGTTGAAGTTGAGGCCCTTCACAAGGATGAGCCTCAATTATCTGGTGGTTTCAATGCATCTGATGACCTGGAAAACACAAAGGGGGTGATATTGGGGAAGCCTCTTGATGTCATTGTTGAAGACCAAGATAATAACTCTGGTAGTGTGAGTTGTGATGTCACTAACAAAGATGatgatgttgatgatgatgatattgatGGTACTCATAAAGACAGCGGGGAGAAATTGAGGTTGGAGCAAAATTTTGATTCTGCAAACCTAAAACTTGATGCAACAGAAGCAATAGAAGTTGCATGA 2064 0.4104 MSETSPVFVEWEEQIICQERGNRVTHFYLKDASGNSVLAVVGTERSIRHMMYVVSDEFLQVYGAKDTISTCKWRARREVVDWLTYLVSRSSQQHLDDLSVLMNDSAHAVEPLDVLAAGIGANKKYLPDKMVSRKLKFQSSDIEWSGAAWFCAKQLKHYSGFFRNGTTIYVHSFVYLMAEEEIHYLGYLEDMYEDKKGQKKVKVRWFHHGQEVKRVIPQLNLQPGEVFITPHVQVISAECVNGPAAVLSPKHYEKCLSAMPHTSSAEVHVCSRQFKNNKLKPFSVTKLRGYGNQSVLSCLNSPILSKRKAKSQKLHREDDEDFSQEDHLRPSNKRNKTSKGHQVLGKCSSGLQNVANKNEMKKCEPAYPRLKLRLSRKTMGIKVIGPKPQSHLSFQVGEKIEILCQDSGIRGCWFRCKILYVSQKQIKVQYDDVVDVDGLGKLEEWVPASRVAAPDKLGIRCSGRLTVRPCPPEDTVDRTLEIGASVDAWWSDGWWEGVITAIDVCGVDTLQVYSPGEGKFLDLEKKDVRISRDWVGNRWVDLQGKPDICSFLSSNVAPSIKPAAHSDVADGPVSDFSAILESKFLLIPEVEVEALHKDEPQLSGGFNASDDLENTKGVILGKPLDVIVEDQDNNSGSVSCDVTNKDDDVDDDDIDGTHKDSGEKLRLEQNFDSANLKLDATEAIEVA 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2633 687 MobiDBLite consensus disorder prediction 311 333 - -
Sto13g2633 687 PANTHER BROMO ADJACENT-LIKE DOMAIN PROTEIN 6 585 - -
Sto13g2633 687 SMART agenet_At_2 478 536 IPR014002 -
Sto13g2633 687 SMART agenet_At_2 392 457 IPR014002 -
Sto13g2633 687 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 6 585 - -
Sto13g2633 687 Pfam Agenet domain 397 472 IPR008395 -
Sto13g2633 687 Gene3D - 133 299 IPR043151 -
Sto13g2633 687 Pfam BAH domain 167 279 IPR001025 GO:0003682
Sto13g2633 687 SMART BAH_4 166 285 IPR001025 GO:0003682
Sto13g2633 687 MobiDBLite consensus disorder prediction 309 343 - -
Sto13g2633 687 ProSiteProfiles BAH domain profile. 166 285 IPR001025 GO:0003682
Sto13g2633 687 MobiDBLite consensus disorder prediction 631 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2633 Sto-Chr13 32217339 32224131 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2633 406 534 PHD Transcription Factor Family AT5G58610 30.075 1.83e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2633 - - gmx:100816046 887.871