Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2630 ATGGAATCCCaatcttcttcatttttggtcattaccttcttcctctccttctttATACTTTGGCTTGCTAGGAAGTACAAGCAAAACACAAGGGTAACCCATAAACTTCCCCCAGGGCCATGGAAGCTACCCCTAATAGGGAATCTTCATCAACTAGCTGCAGCATCAGCAAGCTCACCTCCCCACCATGCTCTGCGGAAACTATCCCAAAAATTTGGACCTTTAATGCACCTTCAGTTCGGTGAAATTTCTGCAGTGGTAGCTTCATGTCCAGACACAGCCAAGCAGATCATGAAAACTCATGACCTTGCTTTTGCACACAGGCCACATTTACTTTCCGCAGAAATCCTAGCCTATGGGTCAATGGACATAGCGTTTGCCCCTTATGGTGAATATTGGAGACAAATGAAGAAAATATGCACGTTGGAGCTTCTAAGTGCAAAGAGGGTTCAATCCTTCTCTTATATCCGAGAGGATGAGAATGGCAAGCTCATACAATCAATACGGTCATCCTCAGGTTCACCACTTAACCTTAGCAGCATGCTTGTGAACTTGACCAGTacggttgtttcgagggttgtgTTTGGCAAGATATCAAAAGAGCAAGAAGAGTTTGTGAGTGCTGTGAAGGAAGCAATACAAGTGTCGGATGGTTTTGATGTTGCTGATTTGTTTCCTTCACTGAAACCTGTTCATGATCTCATGTCTGGGATCATGACCAAATTGGATAAGATCCGTAGGAAACGTGACAAGGTCTTGGACAAGATTATAGCTGAGAATCAAGAAAAGGTGAGGACAAGAAAACAGAACATGCAGAGTGAAGCAGAAGCAGGGGACGAGAATCTCGTTGAGGTTCTTTTGAGGGTCCAACAGAGTGGTAACCTTGACATTCCAATCACAATCAACAGCATCAAAGCTGTAATTTGGGACATGTTCGCTGCTGGAACAGATTCTTCAGCAACTGTATTAGAGTGGGCCATGTCAGAGTTGATGAAAAACCCAAGAGTGAGGGAGAAGGCACAAGCTGAGGTAAGACAAGCTTTTAGAGGAAAGGAAACAATCCATGAGAGCGATGTGAGTGAACTCAACTACTTGAAGTCAATAATCAAAGAAACATTAAGGTTACACCCACCTGGTCCATTATTGGTTCCAAGAGAATGCAAAGAAGCATGTAAGATCAATGGATATGAAATACCCATAAAGACTCATGTAATGGTGAACGCATGGGCAATTGGAAGAGACCCTAAGCATTGGCATGAGGCAGAGAGGTTCATGCCAGAGAGGTTCCATGATTCCAATATAGATTTCAGAGGAACCAATTTTGAGTACATTCCTTTTGGAGCAGGAAGGAGAATGTGTCCAGGCATTTCATTTGGGTTAGCAAATGTGGAGCTTCCTCTGGCCAAATTACTCTATCACTTCGACTGGCAACTTCCAAATGGAATGAAGGCAGACGACTTGGACATGGCTGAAACCTTTGGAGCTGTAGCTGGAAGGAAGAACAATCTCTACCTAATTCCCATTCCTTATGAGTTATAA 1539 0.4172 MESQSSSFLVITFFLSFFILWLARKYKQNTRVTHKLPPGPWKLPLIGNLHQLAAASASSPPHHALRKLSQKFGPLMHLQFGEISAVVASCPDTAKQIMKTHDLAFAHRPHLLSAEILAYGSMDIAFAPYGEYWRQMKKICTLELLSAKRVQSFSYIREDENGKLIQSIRSSSGSPLNLSSMLVNLTSTVVSRVVFGKISKEQEEFVSAVKEAIQVSDGFDVADLFPSLKPVHDLMSGIMTKLDKIRRKRDKVLDKIIAENQEKVRTRKQNMQSEAEAGDENLVEVLLRVQQSGNLDIPITINSIKAVIWDMFAAGTDSSATVLEWAMSELMKNPRVREKAQAEVRQAFRGKETIHESDVSELNYLKSIIKETLRLHPPGPLLVPRECKEACKINGYEIPIKTHVMVNAWAIGRDPKHWHEAERFMPERFHDSNIDFRGTNFEYIPFGAGRRMCPGISFGLANVELPLAKLLYHFDWQLPNGMKADDLDMAETFGAVAGRKNNLYLIPIPYEL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2630 512 Coils Coil 242 262 - -
Sto13g2630 512 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 PANTHER CYTOCHROME P450 71D8 8 511 - -
Sto13g2630 512 Pfam Cytochrome P450 37 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Sto13g2630 512 SUPERFAMILY Cytochrome P450 37 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 Gene3D Cytochrome P450 29 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 PANTHER OS08G0105600 PROTEIN 8 511 - -
Sto13g2630 512 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2630 512 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2630 Sto-Chr13 32190378 32192343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2630 6 508 Cytochrome P450 AT5G25120 41.797 1.42e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2630 - - gmx:100800554 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2630 13 32190378 32192343 Sto13g2630 13 32190378 32192343 ECH