Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2618 ATGCAAACCTCTCAGAAACACGCAAATTCAGCTGGTATCTATTTGTACCACCAGCCTGTGCAAGATGCTGAACCCTACAATTTGTCCAATTACCAAAATTCACAAAGCAATTTATGCCATGATAGCCATGATAGCAGCAGCCAGGGAACCAGTGTTACTTTTGAAACCTACAAGGAGCAACATTTTACCCTGGACTCATCTGCCGGGACAACTGCTCACGCAGTTTGTGATTCCCCTTCTGGTGCCAGCATTTCATCTAATAGAAGTCCTTTCTCTCCACAAAGTTCTCATTCTTGCTATTCAGATCAGCCCCAATCCTTCGACAATACCTATGGATCACCAATAAGCTGGTCCTCTAGTGCTGATGATGGCAATGAACTGAAGCACAAACTTAGAGAACTAGAGATTTCATTGTTGGGACCTGAATCTGACATTGTTGATAGCTGTTACTGCTCCTTTAAGGGTGGCTtacaccaagcttctccaattGCTGGATGGAACTGGGACCAGATTGTAGAAATAATTCCAAAGTTAGATTTGAGACAAGTTCTTGTTGCTTGTGCACAAGCTGTGTCTGATGGGGACATTCCTACAGCAGTAGGCTGGATGGATAATGTATTGGGAAAGATGGTGTCAGTCTCTGGGGAGCCAATCCAACGGTTGGGTGCTTACTTATTAGAAGGGCTTAGAGCAAGGTTGGAATCATCAGGGAGTCTAATCTACAAAGCCTTGAAATGTGAACAGCCAACAAGCAAAGAACTAATGAGTTACATGCACATACTCTATCAGATTTGCCCATATTGGAAGTTTGCTTATGTATCTGCAAATGCTGTCATCAAAGAAGCAATGGCAAATGAATCCAGAATTCATATCATTGACTTCCAAATTGCACAGGGCACTCAGTGGATGATACTTATGAACGCCCTTGCAAATCGGCCTGGTGGGCCTCCCTCCATTCGTATCACTGGTGTCGATGATTCTCAATCATTTCATGCTCGGGGTGGAGGACTTCATATTGTAGGAGAACGGTTGTCAAATTATGCCAAATCTTGTGGAGTGCCATTCGAGTTCCATAGCGCAGCCATGTCCGGTTGTGAGGttcaacaagaaaatcttggAGTTCAACCTGGGGAAGCCCTGGCTGTGAATTTTCCTTATGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACTGAGAACCATAGAGACAGACTCTTGAGATTGGTAAAAAGCTTGTCACCTAAGGTTATGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCACCCTTTTTCCAAAGGTTTATTGAGACCATGGATTACTATACAGCTATGTTCGAATCAATTGATGTCGCCCGCCCCCGAGATGATAAGCAGCGGATTAGCGCAGAGCAACACTGCGTGGCCCGGGACATTGTCAACATGGTAGCTTGTGAGGGGGCTGAGAGGGTAGAAAGGCATGAACTTTTAGGGAAGTGGAGACTCAGATTTTCCATGGCAGGATTTACGCAGTACCCACTGAGTTCCTCAGTGGCAGTCGCAGTCCGAGATCTATTGAAGGAGTTCAATGAAAAGTATAGGCTTGAGGAGAGAGATGGTGCTCTCTATCTTGGATGGATGAACAGAGCTTTGGCTACCTCTTCTGCCTGGAGGGGCTAA 1659 0.4436 MQTSQKHANSAGIYLYHQPVQDAEPYNLSNYQNSQSNLCHDSHDSSSQGTSVTFETYKEQHFTLDSSAGTTAHAVCDSPSGASISSNRSPFSPQSSHSCYSDQPQSFDNTYGSPISWSSSADDGNELKHKLRELEISLLGPESDIVDSCYCSFKGGLHQASPIAGWNWDQIVEIIPKLDLRQVLVACAQAVSDGDIPTAVGWMDNVLGKMVSVSGEPIQRLGAYLLEGLRARLESSGSLIYKALKCEQPTSKELMSYMHILYQICPYWKFAYVSANAVIKEAMANESRIHIIDFQIAQGTQWMILMNALANRPGGPPSIRITGVDDSQSFHARGGGLHIVGERLSNYAKSCGVPFEFHSAAMSGCEVQQENLGVQPGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVMTLVEQESNTNTSPFFQRFIETMDYYTAMFESIDVARPRDDKQRISAEQHCVARDIVNMVACEGAERVERHELLGKWRLRFSMAGFTQYPLSSSVAVAVRDLLKEFNEKYRLEERDGALYLGWMNRALATSSAWRG 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2618 552 Pfam GRAS domain family 180 551 IPR005202 -
Sto13g2618 552 ProSiteProfiles GRAS family profile. 171 551 IPR005202 -
Sto13g2618 552 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 22 550 - -
Sto13g2618 552 MobiDBLite consensus disorder prediction 32 51 - -
Sto13g2618 552 MobiDBLite consensus disorder prediction 78 105 - -
Sto13g2618 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 550 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2618 Sto-Chr13 32148553 32150567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2618 1 551 GRAS Transcription Factor Family AT4G17230 60.289 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto13g2618 GRAS 3.5e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2618 - - gmx:100819190 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2618 13 32148553 32150567 Sto13g2618 13 32148553 32150567 ECH