Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2597 ATGATTCATCCTCTTGATAGGAAACAGTCAAAATTTGGAGCTTTGCGTCCTAGTTTGACAGAATTGTGGCCAAGGAACACAAGAGGCTTCTTGCTAGAAAATCAATTATTGAGAAGAGgaaagaagaacaagaaagaCATGGAACGTGAGGAGGAGTCAAAAAGATTAAGACTAGAGAAAATAACTGAGGAAGCAGAACAAAGAAGACTTGCCACCGAGTATGAGCAGAGAAAGAACGAAAGGATACTCAGGGAAATGAAGAAGCCCAAGTTTTGCTTCAGGAGGATGAAAAGCGAAAAGATGACCAGACAAACCTTGATGGAGTTGACTTTGACTGAGCAACTTGGAGAAAGAcaggaaatggaaaagaaactgCAAAAATTGGCTAAGACAATGGTTTATTTGGAAAGGGCCAAGAGGGAAGAGGCTGCTCCCCTGATTGAAGTTGCTTATCAAAAGCGCCCAGTGGAAGAGAGGATTCTTCATGAGCGTGAGCAAAAGATGAGCATGAGAATTGGTAGCTCTACCAACGGTGAACCTAAAGACGAAAACCTTGTGAGGCCTATGGGTTTTCGTGAGATACATAAGGGCATTGAAGTGATCAACACCTTGGGTTCTAAAGAATATACTCATCCTGTTTCTTTGCTGGCTCCTGTCCAGAGAAATGTAGGACAGAGTGCACATTACGCAATATTACGGAAAGAGATTGCTTGCTATTTCCATTCTCGGTACAAATCCAGGACATACAAGAAGAATGATAACGTTAAAGTTGGTGATGTTGTGGTCAAGAATCAAGATTTCATCGAGGCTACTCAAGAAAGTAATATCTTTATTTTGTGTCAGCCAAGTTTGATGGGACAGTTGGCCTTGGACTTCAGTAAATCTCAGTTGAGAAAGCAGTGCCAGTACAATATGGTGGAGCAAGATGTTGTTGATGAGAAGGTGTTCTCTTTCTGGCACAACGCAGATCCGGAGGCACTAAATTTAGTTTGA 993 0.4028 MIHPLDRKQSKFGALRPSLTELWPRNTRGFLLENQLLRRGKKNKKDMEREEESKRLRLEKITEEAEQRRLATEYEQRKNERILREMKKPKFCFRRMKSEKMTRQTLMELTLTEQLGERQEMEKKLQKLAKTMVYLERAKREEAAPLIEVAYQKRPVEERILHEREQKMSMRIGSSTNGEPKDENLVRPMGFREIHKGIEVINTLGSKEYTHPVSLLAPVQRNVGQSAHYAILRKEIACYFHSRYKSRTYKKNDNVKVGDVVVKNQDFIEATQESNIFILCQPSLMGQLALDFSKSQLRKQCQYNMVEQDVVDEKVFSFWHNADPEALNLV 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2597 330 Pfam Eukaryotic aspartyl protease 235 323 IPR033121 -
Sto13g2597 330 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 173 - -
Sto13g2597 330 Coils Coil 111 138 - -
Sto13g2597 330 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 173 IPR027512 GO:0005852
Sto13g2597 330 Gene3D Acid Proteases 220 328 IPR021109 -
Sto13g2597 330 SUPERFAMILY Acid proteases 236 324 IPR021109 -
Sto13g2597 330 Coils Coil 44 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2597 Sto-Chr13 32012667 32015891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2597 1 197 Eukaryotic Initiation Factors Gene Family AT4G11420 43.439 9.44e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2597 K03254 - gmx:100782598 195.282