Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2585 ATGGCGGGGTCATGTTTCCACCCACTTCGCCTATGGAGATCGAAGAGGAGGCCATTACCTGtggcttcttcttcatcatccagGAGGCAGCTAGATTGTGATGTGGTGGAGAATCAGAATATGGAGAGGAAGAGATTTGACAGCTTGGAATCATGGTCCATGATTTTGGATTCTGAGAATGTGGAGACATGGGAGGCCTCAGAGGAGGATCAGGAAGAATGGAATGCTGATCTCTCACAGCTTTTTATAGGAAACAAGTTCGCTTCTGGAGCTCATAGCCGGATTTACCGTGGGATTTACAAGCAGCAAGCCGTGGCTGTGAAAATGGTTAGGATTCCCACACAGGAGGAGGACAAAAGAACTTTACTTGAGCGGCAATTTAAATCTGAAGTTGCTCTACTTTCACGTCTCTTTCATCCTAATATAGTGCAGTTTATTGCAGCTTGTAAAAAACCGCCTGTGTACTGTATCATAACAGAATACATGTCACAAGGAACTCTGAGGATGTATCTGAACAAGAAAGGGCCATACTCTCTTCCAACAGAAACTATACTAAGATTAGCTCTTGACATATCTAGGGGAATGGAGTACCTTCATTCACAAGGTGTGATCCACAGAGACCTCAAATCAAACAACCTGCTTCTCAACGACGAGATGAGGGTTAAGGTTGCAGATTTCGGTACATCATGTCTGGAGACGCGATGCCGGGAAACCAAAGGAAACATGGGGACGTACCGTTGGATGGCGCCGGAGATGATCAAGGAAAAACCCTATACTCGGAAAGTTGATGTCTATAGTTTTGGAATTGTGCTTTGGGAGCTCACTACTGCATTACTTCCCTTCCAAGGAATGACCCCTGTGCAGGCTGCTTTTGCTGTGTCTGAGAAGAACGAAAGGCCTCCACTGCCGGAAAGTTGTCAGCCGGTACTTGCACATCTGATAAAGCGTTGCTGGTCAGTAAATCCTTCAAAGAGACCGGATTTCAGAGATATAGTGTGTGCTTTGGAGAAGTATGATGAGTGTGTTAAAGAGGGCCTACCTCTAACCCATCATTCACCATTACTCAACAAAAATCTCATTATTCAACGCTTAAAAGGCTGTGTATCCATGACTTCCTCTATACCTGTACATGCATGA 1137 0.4415 MAGSCFHPLRLWRSKRRPLPVASSSSSRRQLDCDVVENQNMERKRFDSLESWSMILDSENVETWEASEEDQEEWNADLSQLFIGNKFASGAHSRIYRGIYKQQAVAVKMVRIPTQEEDKRTLLERQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKGPYSLPTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVSEKNERPPLPESCQPVLAHLIKRCWSVNPSKRPDFRDIVCALEKYDECVKEGLPLTHHSPLLNKNLIIQRLKGCVSMTSSIPVHA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2585 378 Gene3D Phosphorylase Kinase; domain 1 70 163 - -
Sto13g2585 378 SUPERFAMILY Protein kinase-like (PK-like) 60 334 IPR011009 -
Sto13g2585 378 ProSiteProfiles Protein kinase domain profile. 81 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2585 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Sto13g2585 378 Pfam Protein tyrosine and serine/threonine kinase 83 334 IPR001245 GO:0004672|GO:0006468
Sto13g2585 378 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 10 366 - -
Sto13g2585 378 Gene3D Transferase(Phosphotransferase) domain 1 164 354 - -
Sto13g2585 378 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 366 - -
Sto13g2585 378 SMART serkin_6 81 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2585 378 CDD STKc_MAP3K-like 88 332 - -
Sto13g2585 378 PRINTS Tyrosine kinase catalytic domain signature 159 172 IPR001245 GO:0004672|GO:0006468
Sto13g2585 378 PRINTS Tyrosine kinase catalytic domain signature 197 215 IPR001245 GO:0004672|GO:0006468
Sto13g2585 378 PRINTS Tyrosine kinase catalytic domain signature 243 253 IPR001245 GO:0004672|GO:0006468
Sto13g2585 378 PRINTS Tyrosine kinase catalytic domain signature 262 284 IPR001245 GO:0004672|GO:0006468
Sto13g2585 378 PRINTS Tyrosine kinase catalytic domain signature 306 328 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2585 Sto-Chr13 31958612 31961181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2585 1 378 MAP Kinase Kinase Kinase AT1G62400 78.372 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto13g2585 PK_Tyr_Ser-Thr 8.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2585 - - gmx:100803225 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2585 13 31958612 31961181 Sto13g2585 13 31958612 31961181 ECH