Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2583 ATGGTCGCCGGAGGAATATTCCGTCAATGTGTATCACCCATCATTCTCATTCCCCTGTTTTTGTTGCTCTGTCTCGTTGCTTCATCTCAATCCAATGATTTTGAGTTGCTCATGAAGCTCAAGTCCTCAATCCATAGTCCAAATGCTGATGTTTTCAGTTCGTGGACGCAAGCCGATTCTCTCTGCAATTTCACTGGGATTGTATGCAATTCCAATGGGTTTGTTTCAGAAATCAATCTTCCCCAAAAACAACTAGTGGGTACGATTCCCTTTGACTCAATTTGTGCACTTCAGACGCTCGAGAAAATGTCTCTAGAGGCTAACTTCTTCCACGGTGGCATCAGTGACGACCTGAGGAACTGCAGTAATTTGAAGTACTTAGATTTGGGCGGGAATTCATTCTCTGGGGTGGTTCCTGATTTGTCGTCTTTGAACCAGCTGGAGTATTTGAATTTAAACGCAAGTGGAATTTCTGGGGCATTTCCATGGAAATCATTGGAGAATCTAACTAATCTCTCCTTCTTAAGCCTTGGGGATAACCTACTGGAGAGAAGTCCTTTTCCTGAGGAGATCTTGAAGCTTGAGAAATTGTACTGGCTTTACCTCACAAATTGCAGCATTACAGGGAAAATCCCAGTGGGTATTGGGAATCTCACTTTGCTTGAGGAGCTTGAGATTTCTGATAATTATCTGGTTGGTGAAATTCCAGCTGAAATTACAAAGCTTCAGAAGCTATGGCAACTTGAGATATATGATAACTTCTTGACTGGGAGAATCCCTTTTGGGTTTGGGAACCTTACAAGTCTTGTTTACTTTGATGTTTCTAATAATCAGCTTGAAGGTGATCTCTCTGAGGTAAGGTTCTTGACTAGTCTTGTTTCTCTTCAGCTTTTTCAGAACAAATTCTCTGGAGGAATCCCACAAGAACTTgcagatctcaaaaaccttaCAGATATTTCTCTCTATGACAATAAGCTCACTGGTTTTCTACCTCAAAAGCTAGGCTCATGGGGAGGCTTAGCATTCATAGATGTTTCAGATAATTCTCTATCAGGTCCTATTCCACCTGACATGTGCAAGAACAACAAAATGACAGACCTAGCATTATTGAACAACAGCTTCAATGGGAGCATACCAGAAACATATGAAAACTGCTTGTCTTTGGGTCGTTTACGTGTAAATAGCAATTCTCTTTCAGGTATTGTTCCTTCTGGTATATGGGGCTTGCCAAATTTAGAACTAATTGATCTTTCAAAAAACCAATTTCAAGGTCCTGTGTCTTCTGATATATCTAAAGCAAAATCTCTAGCTCAACTTTTCTTATCTCACAATCAGTTCTCAGGTGAGTTACCATTGACACTCACAGAAGCTTCTTCTTTGGTGTCAATTCAGTTAAGCTCAAATAATTTGTCTGGTAATATCCCTGAAACAATTGGCCAGTTGAAGAAACTGACTAGTCTTAATTTAAATGGGAACAACTTATCTGGCATCATCCCAGTGTCACTAAGTTCTTGTCTTTCTCTTAGTGAAATAGACCTTTCTGGTAATTCCCTATCTGGGGAAATCCCACATAATCTTGGCTCTCTCCCCACTCTAAACTCATTGAACTTATCCTCAAATAGGCTTTCTGGTGAAGTTCCATCAAGTTTGTCATCACTTAAACTTAGCCTTCTTGATCTATCAAACAACAACTTGTCTGGTCCCATACCAGAATCAGTCTCTATTCCAGCATTCCAAGATGGGTTTAAAGGGAACCCTGGCTTGTGCAGCCAGACATTGGAAAACTTGAAACCATGCTCCATGGATTCTTCTTCTAGCCCCAAGAGAATCCGAACCCTTGTCCTCTATTTCATCATTGCTGGTATCACAGTTGTTCTAGTTTTCTTAGCATGTCTCCTCTTCATGAGACTGAAGCTGAACAAGCTGAAGGAGGCAGCACTGAAGACAAACTCATGGGATTTGAAGCAGTACCATATGTTGAACTTAAACGAAAATGAGATCATTGAGGGCATCAAAGCTGAGAATTTGATAGGCAAAGGAGGCTCAGGGAATGTGTACAAAGTTGTGCTTGGATGTGGGAAAAAACTGGCTGTCAAACACATATGGACTACAAATCCAGGTGAGCCTAGAGTCTACCAGAGCAGCTCGGCTATGCTGAAAAGAAGCCGGCGGTCACGGGAGTATGACGCGGAAGTGGCCACCCTGAGCTCCATAAGGCATGTGAATGTGGTGAAGCTGTATTGCAGCATAACAAGTGAAGATAGTAGCCTGCTTGTTTATGAGTTCTTACCAAATGGGAGCTTGTGGGAGAGGCTGCATTGCTGTGAGAAGAGCAAGATGGGGTGGGAAGTTAGGTATGAGATTGCATTAGGGGCTGCAAGAGGGTTGGAGTATTTGCATCATGGGTGTGATAGAGCAGTAATACACAGGGATGTGAAGTCCAGTAATATATTGCTAGATGAGGATATGAAGCCAAGGATTGCTGATTTTGGACTTGCCAAGATTGTACATGGAGGAGCAGGCAATTGGACTCATGTCATTGCTGGTACACTTGGATACATGCCTCCTGAGTATGCCTACACTTGTAAGGTGAGTGAGAAGAGCGATGTGTACAGCTTTGGGGTAGTGCTTATGGAGTTGGTGACAGGGAAGAAGCCTATTGAAGCAGAGTTTGGAGAGAACAAGGACATTGTGTATTGGGTTTGCAGCAACATCATGAAGAAGAGGAAGCACCAAGACTTGCTTCAAATGGTGGATTCCACCATTCCCATGCATTTCAAAGAGGATGCTTTCAAGGTGTTGAGAATTGCTATGCTCTGTACTGCCAAAATTCCAGCTTCAAGGCCTTCCATGAGAATGGTTGTTCAAATGCTAGAAGAGGCTGACCCTTGTGCTCTACCAacgttatga 2910 0.4206 MVAGGIFRQCVSPIILIPLFLLLCLVASSQSNDFELLMKLKSSIHSPNADVFSSWTQADSLCNFTGIVCNSNGFVSEINLPQKQLVGTIPFDSICALQTLEKMSLEANFFHGGISDDLRNCSNLKYLDLGGNSFSGVVPDLSSLNQLEYLNLNASGISGAFPWKSLENLTNLSFLSLGDNLLERSPFPEEILKLEKLYWLYLTNCSITGKIPVGIGNLTLLEELEISDNYLVGEIPAEITKLQKLWQLEIYDNFLTGRIPFGFGNLTSLVYFDVSNNQLEGDLSEVRFLTSLVSLQLFQNKFSGGIPQELADLKNLTDISLYDNKLTGFLPQKLGSWGGLAFIDVSDNSLSGPIPPDMCKNNKMTDLALLNNSFNGSIPETYENCLSLGRLRVNSNSLSGIVPSGIWGLPNLELIDLSKNQFQGPVSSDISKAKSLAQLFLSHNQFSGELPLTLTEASSLVSIQLSSNNLSGNIPETIGQLKKLTSLNLNGNNLSGIIPVSLSSCLSLSEIDLSGNSLSGEIPHNLGSLPTLNSLNLSSNRLSGEVPSSLSSLKLSLLDLSNNNLSGPIPESVSIPAFQDGFKGNPGLCSQTLENLKPCSMDSSSSPKRIRTLVLYFIIAGITVVLVFLACLLFMRLKLNKLKEAALKTNSWDLKQYHMLNLNENEIIEGIKAENLIGKGGSGNVYKVVLGCGKKLAVKHIWTTNPGEPRVYQSSSAMLKRSRRSREYDAEVATLSSIRHVNVVKLYCSITSEDSSLLVYEFLPNGSLWERLHCCEKSKMGWEVRYEIALGAARGLEYLHHGCDRAVIHRDVKSSNILLDEDMKPRIADFGLAKIVHGGAGNWTHVIAGTLGYMPPEYAYTCKVSEKSDVYSFGVVLMELVTGKKPIEAEFGENKDIVYWVCSNIMKKRKHQDLLQMVDSTIPMHFKEDAFKVLRIAMLCTAKIPASRPSMRMVVQMLEEADPCALPTL 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2583 969 SUPERFAMILY L domain-like 191 452 - -
Sto13g2583 969 Gene3D Transferase(Phosphotransferase) domain 1 763 964 - -
Sto13g2583 969 CDD STKc_IRAK 677 960 - -
Sto13g2583 969 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 966 - -
Sto13g2583 969 SMART serkin_6 671 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2583 969 Pfam Leucine rich repeat 459 518 IPR001611 GO:0005515
Sto13g2583 969 Pfam Leucine rich repeat 388 446 IPR001611 GO:0005515
Sto13g2583 969 SMART LRR_typ_2 313 337 IPR003591 -
Sto13g2583 969 SMART LRR_typ_2 481 504 IPR003591 -
Sto13g2583 969 SMART LRR_typ_2 218 242 IPR003591 -
Sto13g2583 969 SMART LRR_typ_2 529 553 IPR003591 -
Sto13g2583 969 SMART LRR_typ_2 121 144 IPR003591 -
Sto13g2583 969 SMART LRR_typ_2 169 194 IPR003591 -
Sto13g2583 969 SMART LRR_typ_2 409 433 IPR003591 -
Sto13g2583 969 Gene3D Ribonuclease Inhibitor 32 141 IPR032675 -
Sto13g2583 969 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524
Sto13g2583 969 Gene3D Phosphorylase Kinase; domain 1 653 762 - -
Sto13g2583 969 Pfam Protein kinase domain 674 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2583 969 SUPERFAMILY Protein kinase-like (PK-like) 665 959 IPR011009 -
Sto13g2583 969 SUPERFAMILY L domain-like 387 668 - -
Sto13g2583 969 ProSiteProfiles Leucine-rich repeat profile. 483 504 IPR001611 GO:0005515
Sto13g2583 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Sto13g2583 969 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 14 966 - -
Sto13g2583 969 Gene3D Ribonuclease Inhibitor 142 290 IPR032675 -
Sto13g2583 969 Gene3D Ribonuclease Inhibitor 291 600 IPR032675 -
Sto13g2583 969 SUPERFAMILY L domain-like 30 245 - -
Sto13g2583 969 ProSiteProfiles Protein kinase domain profile. 671 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2583 969 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2583 Sto-Chr13 31952305 31955528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2583 20 966 Receptor kinase-like Gene Family AT1G09970 56.499 0.0 1038
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto13g2583 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2583 - - ccaj:109814095 1347.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2583 13 31952305 31955528 Sto13g2583 13 31952305 31955528 ECH