Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2561 atggcttcttcttcttctcatcatcatcatcatcacgcACTTGTACTGGAAACTACCATTaccatcttcttccttctccaaaTTACATTATTCCCTCCCGCTACCTCACTCTCCTTCAACTTCCAGGGCTTCAACATAAGCGACGTCAACCTCCAAGGAGAAGCCCTCCTCCCTCCTAATCCACCCTCCGAAATCCAGATCACCGCCAACAGAAGAGACGAAGCCAACAAGTACAGCGTCGGGCGCGTCACCTCCAACCAACTCCTCCGCCTCTGGGATAAGAATTCCACTAACCTCACCGACTTCTCCACCTCTTTCTCCTTCATCGTCTTCTCCGACCAGGAAAGCTTCGGCGACGGCCTCgccttcttcctcgccgacccCTCCCTCCCCCTCCTCACCGCCATCTCCCAGGGCGGCGGTCTCGGTCTCGTCGACGGCAACGGCGATCAAGTCCCCCGCTCCACCCAACGCTCCAATTCCTTCGTCGCCGTCGAGTTCGACACTTTCTCCAATCCCAAATGGGACCCACCCGGGGTCCACGTAGGCATCAACGTGAACTCCATGCGATCCGTTATCACGCGCGCGTGGTCTCCGGATATTGCGGTGAGGAAATCTTACAACTGTACCGTGGAGTATAATTCCAGTACTCTCACCCTCACCGTTTCTTTCACTGGAAACAACCGCGAGACGAGTTTTGCCTACCTGATTGACCTGAGAAACCACTTACCGGAAACGGTTATGATTGGATTCTCCGCCGCCACAGGTAATCTATTTGAGGTTCACATTCTTCAGTCCTGGTCGTTTAATTCGAGCCTCCCCGATACAGCCGATCCGGTGATCACAGAACCATCCTTACCGGAACTCCAAAACGACAACAATGATCATCGTCGCCGTgatgatgaaaagaaaaagaaggtgtGGCTATTGGTGGGCGTAGGATCTTGCGTGGGCTTCGCTCTGAGTTTCCTCGTGTTCATGTCTGTTTTCTGTTGGAAGAAGATGATTACGGCtagaaggagaaaagaagaacaAGTAGTTTACGATATTCAGAATATGGACGAAGAGTTCACCGAAGGAAGTGGACCCAGGAGGTTTCGCTATAGTAACCTGGTGGCCGCCACGAGCAACTTCTGCGAGTCCAAGAAGCTAGGACAAGGAGGGTTCGGAGGAGTCTACAAAGGCTATTTGAAAGACGCGAATTCGCAAGTCGCGATCAAGAGGATTTCCAAAGACTCCACGCAAGGGATAAAGGAATACGCGACGGAGGTAAAAATCATCAGCCAGCTGAGGCACAGGAATTTGGTGCAACTATTAGGGTGGTGTCACAAGAAAAACGACCTCCTCCTCGTCTACGAGTTCATGCCAAACGGGAGCCTAGACTCCCACCTCTATAACAATAATAACGGCCTGCTGACGTGGCAGGTGAGGTACAAGATCGCACTAGACTTAGCGTCGGCTCTGCTTTACCTGCACGAGGAATGGTCCCAATGCGTGCTCCACAGAGACATCAAATCGAGCAACGTAATGCTAGACTCGAGCTTCAACGCGAAGCTGGGGGATTTCGGTCTGGCGAGGCTAGTGTCCCACGAGAAAGGGGCTCGAACCACCCTAATAGCGGGGACGAGAGGGTACATAGCCCCAGAGTACGTATTCACGGGGAAAGCGTACAAGGAATCGGACATATACAGCTTGGGGGTAGTATTGCTGGAGATGGCGAGCGGGAGGAGAGCGGTGGAGGGCGAGATGGTAATTTCGGTGGTGGAGTGGGTGTGGGAGCTGTACGGAATGGGGAAGGTGGGAGAGGCGGCGGATGGGAGGCTGTGTGGGGAGTACGATGAGAAGGAAATGGAGAGGATGCTTGTGATTGGGCTGTGGTGCACGTACCCGGAGCACACGATGAGACCGAGTGCGAAGGAGGTGATAAGAGTGCTCAGTTTTGAAGGTGAATTGCCGGATATACCAATGACCATGCCTGTGCCTATATATCTTCCTCCCAGTGTCAAGGCTCTTTTCTCTTCGCTTTCGCCTTCCTTTTGGGCTAAatATTCGGTGTTCTGTCACAATCTTTCACCCCCAGCCCAGATGCAGACTCTCTGTCTCTTGGTTGTTACTTACTCCGTTCGTGACTTGTATCGCCGCTTTCTTTGCATTTTTCTGGGCTTCCTGCTCATGGATTTTTCTTCCACTCTCAAATTCCTCACTCAGATCAGTGAGATTGGATGTGGGTTTTTTCTTCTTGGCTGTTTCTCACCGGTTTTCAATGCCCTCTGCATGGTTTTGGTTTTCGGATTCTGTATGAAGATTTTGCATTTTGGTTGGCATTCTGAGGGTTTCATTCGCTATCTGTTTGATTTCGGAGGAAAACCCAGAAACCCATTTTCTCTGGGGAAAAATTGTGTCGGTGATGAATTTGAGTCGGACTCTGTTTCTTTCAAGTGTAGAATCCCACTGAAATCCTCCCGGATTCCAAATTCACCGAACAAAAACAGTTTATCCGTTGGGGAAGAGAATGAGAACTCTAATGGGGATACGAATTCCGTAGATCTTTCAGAAGAGAAGGCTGATGTTAGTACTGATACTGATAGGGAAGTTCGTGACGAGGACGAGGTGTTCGACGTAATGTCTCTGAGGAAATTGGTGAAAATCGAGAGGGAGCGAGCAAATTCAGCCTATGCAGAGCTTGAGAAGGAAAGGACTGCATCAGCATCAGCAGCAGATGAGGCTATGGCCATGATATTTCGCCTTCAGAGTGAGAAAAGTTCAGTGGAAATCCAAGCCAATCAATACCGTAGAATGGTTGAGCAGAAGCAGGAGTATGACCAGGATGTTATTGAATCATTGCGTTGGATCATCACAAAACAGGAAGATCAATTGAGGATGTACAGGGAGAAGCTGAAGCAGCATATGAGGGAAGATGAAATAGATGAATTGGACAAGACTAACGAGAATAGGGGCTTTTTGAATATGTGTTTGGAAGATGATCCTGATGATTCGGGTTCACTATTTAGTTCTCTTGAAATGGATTCACAGACACACACAACACTTGAAAAGGACTGCACAGCTATGAGTCGGGCAAGAAAGGATGTGACTCCAGTAGGTTTCATGAAAACAAAATGTTGCTGCTGGAATTTGATGCTGTCACATGAAGTAATTATACATTTTCTGCAGTCAAGTTCTGTCATATCGTTAATTCAGGCCAAAAGATTGATGAATGATTTGAATCAAGAGAACTGA 3237 0.4717 MASSSSHHHHHHALVLETTITIFFLLQITLFPPATSLSFNFQGFNISDVNLQGEALLPPNPPSEIQITANRRDEANKYSVGRVTSNQLLRLWDKNSTNLTDFSTSFSFIVFSDQESFGDGLAFFLADPSLPLLTAISQGGGLGLVDGNGDQVPRSTQRSNSFVAVEFDTFSNPKWDPPGVHVGINVNSMRSVITRAWSPDIAVRKSYNCTVEYNSSTLTLTVSFTGNNRETSFAYLIDLRNHLPETVMIGFSAATGNLFEVHILQSWSFNSSLPDTADPVITEPSLPELQNDNNDHRRRDDEKKKKVWLLVGVGSCVGFALSFLVFMSVFCWKKMITARRRKEEQVVYDIQNMDEEFTEGSGPRRFRYSNLVAATSNFCESKKLGQGGFGGVYKGYLKDANSQVAIKRISKDSTQGIKEYATEVKIISQLRHRNLVQLLGWCHKKNDLLLVYEFMPNGSLDSHLYNNNNGLLTWQVRYKIALDLASALLYLHEEWSQCVLHRDIKSSNVMLDSSFNAKLGDFGLARLVSHEKGARTTLIAGTRGYIAPEYVFTGKAYKESDIYSLGVVLLEMASGRRAVEGEMVISVVEWVWELYGMGKVGEAADGRLCGEYDEKEMERMLVIGLWCTYPEHTMRPSAKEVIRVLSFEGELPDIPMTMPVPIYLPPSVKALFSSLSPSFWAKYSVFCHNLSPPAQMQTLCLLVVTYSVRDLYRRFLCIFLGFLLMDFSSTLKFLTQISEIGCGFFLLGCFSPVFNALCMVLVFGFCMKILHFGWHSEGFIRYLFDFGGKPRNPFSLGKNCVGDEFESDSVSFKCRIPLKSSRIPNSPNKNSLSVGEENENSNGDTNSVDLSEEKADVSTDTDREVRDEDEVFDVMSLRKLVKIERERANSAYAELEKERTASASAADEAMAMIFRLQSEKSSVEIQANQYRRMVEQKQEYDQDVIESLRWIITKQEDQLRMYREKLKQHMREDEIDELDKTNENRGFLNMCLEDDPDDSGSLFSSLEMDSQTHTTLEKDCTAMSRARKDVTPVGFMKTKCCCWNLMLSHEVIIHFLQSSSVISLIQAKRLMNDLNQEN 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2561 1078 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Sto13g2561 1078 CDD STKc_IRAK 384 645 - -
Sto13g2561 1078 Gene3D - 34 283 - -
Sto13g2561 1078 SMART serkin_6 378 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2561 1078 ProSiteProfiles Protein kinase domain profile. 378 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2561 1078 ProSitePatterns Protein kinases ATP-binding region signature. 384 407 IPR017441 GO:0005524
Sto13g2561 1078 Pfam Legume lectin domain 36 276 IPR001220 GO:0030246
Sto13g2561 1078 MobiDBLite consensus disorder prediction 825 864 - -
Sto13g2561 1078 MobiDBLite consensus disorder prediction 849 864 - -
Sto13g2561 1078 MobiDBLite consensus disorder prediction 280 299 - -
Sto13g2561 1078 Coils Coil 952 972 - -
Sto13g2561 1078 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 35 682 - -
Sto13g2561 1078 SUPERFAMILY Protein kinase-like (PK-like) 362 678 IPR011009 -
Sto13g2561 1078 Gene3D Transferase(Phosphotransferase) domain 1 455 664 - -
Sto13g2561 1078 MobiDBLite consensus disorder prediction 825 848 - -
Sto13g2561 1078 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 288 IPR013320 -
Sto13g2561 1078 Coils Coil 878 898 - -
Sto13g2561 1078 ProSitePatterns Legume lectins beta-chain signature. 163 169 IPR019825 -
Sto13g2561 1078 Pfam Zein-binding 876 964 IPR007656 -
Sto13g2561 1078 Gene3D Phosphorylase Kinase; domain 1 363 454 - -
Sto13g2561 1078 CDD lectin_legume_LecRK_Arcelin_ConA 37 273 IPR001220 GO:0030246
Sto13g2561 1078 Pfam Protein kinase domain 380 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2561 1078 ProSiteProfiles GTD-binding domain profile. 872 979 IPR007656 -
Sto13g2561 1078 Coils Coil 1064 1078 - -
Sto13g2561 1078 PANTHER - 35 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2561 Sto-Chr13 31722455 31736286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2561 21 663 Receptor kinase-like Gene Family AT5G10530 42.192 4.39e-164 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto13g2561 Pkinase 5.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2561 - - gmx:100780181 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2561 13 31722455 31736286 Sto13g2561 13 31722455 31736286 CCT
Sto13g2561 13 31722455 31736286 Sto13g2561 13 31722455 31736286 ECH