Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2560 ATGACGGATGTCCAAAGCAGTACACAGTTGGGTGAAACCCCACAGATGCTTCCACCACCACCTGGCACTTTTGTTAATCGTGAAGAGCTCATCCAACATGTTGGGGAATTTGCTGTGTCCCAGGGATATGTCGTCACTATTAAACAATCTAAGAGGGACAAAATAGTTGTCCTTGGCTGTGACAGAGGAGGTGTTTATCGCAATAGGCGAAAATTGGCTGAGGAGTCTTCTGCTGAACATAGCCGCAAAAGGAAAACTGGTTCTCGTCTAACAAATTGTCCTTTTGAAGCTGTTGGTAAGAAGGATGATGGCTTGTGGGTACTAACCATAAAAGATGGAACACATAATCATGAACCATTAAAGGACATGTCTGAACATCCTTCTGCTCGTCGCTTCACAGAGAGGGAAGTTTTTCTTATTAAAGAAATGACAGAAGCTGGGTTGAAACCTCGACAGATCCTAAAGAGACTGAGACAAGGCAATCCAGACCTTTTATCAACCCCAAAGCATGTTTATAATGTTAAAGCCAAACTCCGACAAGGAAATATGAAAGTTAGGAATTTCAAATCATTGAGACCTGAGAAAACTGCTGTAAGAAACAATTATATTGCAGTAATTGAACCATCTTGGAGGCAGCACACCCCTCCGAGGGTTCCCAATCTTATTGGAGGAAGATTTGTTGATTCACAGTCATTCGCATCAATTGATATATTGAATCCTgcAAGCCAACAAGTTGTTTCTCAAGTTCCAATGACTACAAATGAGGAGTTTAAAGCAGCTGTTTTTGCAGCAAAACGAGCTTTTTCAATGTGGCGTAACACATCAATTAGTACTAGACAGCGGATCATGTTTAAATTCCAAGAGCTCATCCGTAGAGACATTGATAAAATTGCTATGAATATTACTACTGAACATGGCAAAACACTGCAAGATGCATATGGTGATGTGTTACATGGGCTAGAGGTGGTTGAACAAGCATGTGGTCTGGGAAATCTGCAAACTGGGGAATTTGTTCCCAATATTTCTGATGGCATTGACACATACAGCATTAGAGatcctcttggtgtttgtgctGGGATCTGCCCATTTGACTTTCCAGCTATGATTCCCTTGTGGGTGAGGTGCTGCTGTCTACCTATAGAAGATGAGATGTTTCCTATTGCTGTCACTTGTGGAAATACATTTATTCTAAAGCCATCAGAGATGACTCCTGGAGCATCTGTGATGCTGGCAGAGTTAGCGATAGAGGCCGGTGTTCCTAATGGGGTGTTAAATATTGTTCATGGTACAAATGACATAGTCAATGCTATATGTGATGATGACGATATCAAGGCTATCTCATTTGTTGGTACAAATGCGGATGGTTCATATGTATATGCAAGAGCTTTGGCTAAAGGGAAACGTGTTCAGTCTAATATTGAAGCAAAAAATCATGCTGTTGTAATGCCTGATGCAAGAAGGGATGCTACTTTGAAAGCCTTAGTTGCAGCTGGTTTTGGTGCCGCTGGACAAAAGTGCACAGCCCTGAGTGCTGTTATTTTTGTTGGAAGTTTCAATCAATGgGAAGATAAACTTGTAGAGCGTGCCAAGGCACTCAAGGTAAATGGTGGAACAGAACCATGTACAGACCTTGGTCCAGTAATTAACAAAGAGGCAGAGGAATACACATGCAGATTGATTCAAACAGCAGTGGAATCTGGTGCAAAACTTGTTCTTGATGGAAGAAACATTGTGGTTCCAGGATATGAACATGGAAATTTCATCGGTCCCACCATCTTATCTAACGTCACAGTTAACATGGAGTGCTACAAGGAGAAAATTATTGGTCCAGTTCTTCTTTGTATGCAGGTTGACAGCATAGAAGAGGCCATAAGCATCATCAATAGAAACAAATATGGTAATGGAGCATCCATATTTACATCGTCTAGGGCATCTGCAAGGAAATTCCAGAATGAGGTTGAAGTTAGGCAGGTTGGCATAAATATCTCAGTTTCCATTTCATTGCCATTTTCCTCCTTTATAAGCTCCAAGCCATCTTTTGCCGGTGACTTTAGTTTTGATGGCAAGGCTGGAATTCAATTCTATACCCAGATTAAGACAGTGAGTCAACAGTGGAAAGACTCATTAGATGGGGATGAAGCACCTCTTGGAATGCCATGTTCTTAA 2166 0.4086 MTDVQSSTQLGETPQMLPPPPGTFVNREELIQHVGEFAVSQGYVVTIKQSKRDKIVVLGCDRGGVYRNRRKLAEESSAEHSRKRKTGSRLTNCPFEAVGKKDDGLWVLTIKDGTHNHEPLKDMSEHPSARRFTEREVFLIKEMTEAGLKPRQILKRLRQGNPDLLSTPKHVYNVKAKLRQGNMKVRNFKSLRPEKTAVRNNYIAVIEPSWRQHTPPRVPNLIGGRFVDSQSFASIDILNPASQQVVSQVPMTTNEEFKAAVFAAKRAFSMWRNTSISTRQRIMFKFQELIRRDIDKIAMNITTEHGKTLQDAYGDVLHGLEVVEQACGLGNLQTGEFVPNISDGIDTYSIRDPLGVCAGICPFDFPAMIPLWVRCCCLPIEDEMFPIAVTCGNTFILKPSEMTPGASVMLAELAIEAGVPNGVLNIVHGTNDIVNAICDDDDIKAISFVGTNADGSYVYARALAKGKRVQSNIEAKNHAVVMPDARRDATLKALVAAGFGAAGQKCTALSAVIFVGSFNQWEDKLVERAKALKVNGGTEPCTDLGPVINKEAEEYTCRLIQTAVESGAKLVLDGRNIVVPGYEHGNFIGPTILSNVTVNMECYKEKIIGPVLLCMQVDSIEEAISIINRNKYGNGASIFTSSRASARKFQNEVEVRQVGINISVSISLPFSSFISSKPSFAGDFSFDGKAGIQFYTQIKTVSQQWKDSLDGDEAPLGMPCS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2560 721 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 3 716 IPR010061 GO:0004491
Sto13g2560 721 CDD ALDH_F6_MMSDH 218 705 IPR010061 GO:0004491
Sto13g2560 721 Pfam Aldehyde dehydrogenase family 226 701 IPR015590 GO:0016491
Sto13g2560 721 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 222 679 IPR016162 GO:0016491
Sto13g2560 721 SUPERFAMILY ALDH-like 208 706 IPR016161 GO:0016491
Sto13g2560 721 MobiDBLite consensus disorder prediction 1 22 - -
Sto13g2560 721 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 474 674 IPR016163 GO:0016620
Sto13g2560 721 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE ISOFORM X1 3 716 - -
Sto13g2560 721 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 220 705 IPR010061 GO:0004491
Sto13g2560 721 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 499 510 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2560 Sto-Chr13 31712135 31722281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2560 187 689 Aldehyde Dehydrogenase Gene Family AT2G14170 68.056 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2560 K00140 - qsu:112015070 1139.79