Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2525 ATGAAGATGATGAGTTGGTTTGTGAAAGGTGAGGATGAAACAGAGAGTGGGAATAATAGGTGCTCATCAAGGAAAGGGCAAATTAGAAGCATGGAGGAGGAGATcattatcaataataataataatgatgaggTAGCATtagcaatagaagaagaagaaaaagaaggtaTTTGTGTGACATGGAAGGACGTGTGGGTGACTGTTCCAACTGCAAAACAAGGCTCCAACACAATCCTTCAAGCTCTAACTGGTTATGCCAAGCCAGGACAACTCTTGGCTATAATGGGTCCTTCTGGTTCTGGCAAGTCTACCCTTCTTGATGCCTTAGCAGGTAGGTTGAGCACAAAAGCCAAGCAGACAGGAGATATTCTAATCAACGGCCGCAAACAAGCACTGGCTTATGGAACATCGGCATATCTGACACAAGATGATGCAATATTGACCACCTTAACAGTTGGAGAAGCAGTGTACTACTCAGCTCAACTCCAACTTCCTGATTCAATGTCAAAGTCAGAGAAGAAGGAGAGAGCAGAGTTCACTATCAGAGAAATGGGTCTGCAAGATGCCATTCACACCAGAATTAAAGGCATAAGTGGGGGTCAAAAGAGGAGGGTTAGCATCTGCATTGAGATCCTAACTcgcccttcccttctcttccttGATGAACCAACCAGTGACCTTGACAGTGCTGCTTCCTACTATGTAATGAGCAGGATTGCTAGCTTGAATGACAAGGATGGCATCCAGAGGACTATTGTTGCATCAATTCATCAGCCTAGCACTGAGGTTTTTCAGCTTTTTCACAACCTTTGTCTTCTCTCTTCTGGTCAAGCTGTGTACTTTGGCCCTACTGCTGCTGCAAATGAGTTTTTTGCATCAAATGGTTTCCCCTGCCCTACTCTTCAGAATCCTTCTGATCATTTTGTGAAAACCATAAACAAGGATTTTGAGCAGGAGGATCCTGAGCCAGGATTATCTATAGGACTAATCACAGAAGAAGCTATTCATATCCTTGTGAAATCTTTCAAGTCATCAGCAATCAATCAACAAGTTCAAACAGATGTTGTTAAGATAGGAAAAAGGAATTCTAGTGCAATGGAGATGAAAAACCATGCTCATTTCTTCAAGCAGTGCATTATTCTTACAAGAAGATCATCTGTGAATATGTATCGCGATGCCGGCTACTACTGGTTACGTCTACTTATCTATGGTGGATTGGCTATAAGTTTAGGTACTATCTTCTACAAGATTGGCTCAAACAGTGAATCAATTCAGGCTAAAGCTTCATTGCTTGTGTTTGTAGTCACATTCCTGATTTTCATAACCATTGGTGGCTTCCCTTCCTTTGTGGAGGACATGAAGgtatttgaaagagaaagacTAAATGGCCATTATGGTGTCACTGCATACATCATTGGACACACATGTTCTGCTATCCCTTACTTGCTATTGATGTCAGTGATTCCTGGAGCACTAGTTTATTACCTAACTGGACTTCAAAAAGGAGGCCAACATTTTCTGTACTTCACTTGTGTGCTCTTTGTTTCTGTAATGTTAGTTGAGAGCCTTATGATGATTGTTGCAAGTATGGTTCCCAACTTCTTGATGGGAATAATCACTGGTTCTGGAATTCTGGGAGTAATGATGTTAAATGGAGGATTCTATCGCCTACCTGGCGATCTTCCCAAATTCTTCTGGAGATATCCTTTGTACTACATTTCCATTCACAAGTATGCCTACCAAGGATTGTTCAAGAATGAGTTTGAAGGTCTAACATTTAGTAACAATAAAGTTGGAGCAGCAAGCATAATGAGTGGGAAAGAAATGCTGAGGAATTCTTGGCAAATTGAAGTGGATCACTCCAAGTGGGTTGATCTTTCCATCTTGCTAGGAATGGTAGTGCTGTATAGAATTCTGTTCTTGGTCATCCTCAAGATCATTGAGAAGGTGAAGCCTATTATAGCAGCCTTCAAGTGA 1977 0.3961 MKMMSWFVKGEDETESGNNRCSSRKGQIRSMEEEIIINNNNNDEVALAIEEEEKEGICVTWKDVWVTVPTAKQGSNTILQALTGYAKPGQLLAIMGPSGSGKSTLLDALAGRLSTKAKQTGDILINGRKQALAYGTSAYLTQDDAILTTLTVGEAVYYSAQLQLPDSMSKSEKKERAEFTIREMGLQDAIHTRIKGISGGQKRRVSICIEILTRPSLLFLDEPTSDLDSAASYYVMSRIASLNDKDGIQRTIVASIHQPSTEVFQLFHNLCLLSSGQAVYFGPTAAANEFFASNGFPCPTLQNPSDHFVKTINKDFEQEDPEPGLSIGLITEEAIHILVKSFKSSAINQQVQTDVVKIGKRNSSAMEMKNHAHFFKQCIILTRRSSVNMYRDAGYYWLRLLIYGGLAISLGTIFYKIGSNSESIQAKASLLVFVVTFLIFITIGGFPSFVEDMKVFERERLNGHYGVTAYIIGHTCSAIPYLLLMSVIPGALVYYLTGLQKGGQHFLYFTCVLFVSVMLVESLMMIVASMVPNFLMGIITGSGILGVMMLNGGFYRLPGDLPKFFWRYPLYYISIHKYAYQGLFKNEFEGLTFSNNKVGAASIMSGKEMLRNSWQIEVDHSKWVDLSILLGMVVLYRILFLVILKIIEKVKPIIAAFK 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2525 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 300 IPR003439 GO:0005524
Sto13g2525 658 SMART AAA_5 88 272 IPR003593 -
Sto13g2525 658 MobiDBLite consensus disorder prediction 1 19 - -
Sto13g2525 658 MobiDBLite consensus disorder prediction 1 25 - -
Sto13g2525 658 ProSitePatterns ABC transporters family signature. 197 211 IPR017871 GO:0005524
Sto13g2525 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 289 IPR027417 -
Sto13g2525 658 Pfam ABC-2 type transporter 377 588 IPR013525 GO:0016020|GO:0140359
Sto13g2525 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 37 655 - -
Sto13g2525 658 Pfam ABC-2 type transporter 257 312 IPR043926 GO:0140359
Sto13g2525 658 Gene3D - 47 296 IPR027417 -
Sto13g2525 658 Pfam ABC transporter 81 225 IPR003439 GO:0005524
Sto13g2525 658 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 37 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2525 Sto-Chr13 31422778 31426199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2525 89 261 Calmodulin-binding Proteins AT2G36910 30.851 1.06e-07 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2525 13 31422778 31426199 Sto13g2525 13 31422778 31426199 ECH