Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2524 ATGATGAGTTGCTTTCTGAAAGGTGGTGATGAAACACACAATGGGAACTGGTCCTCAAGGAAAGGGCAAATTAGAAGCATGGAGGAGATGAATGAGGTAGCCATAGAAgtagcagaagaagaagaagaagaagaagaaaaagaaggtaTTTGTCTGACATGGAAAGATGTGTGTGTGACTGTTTCAACTGCAAAAGAAGGTTCAAAGCCAATCCTTCAAGCTCTAACTGGTTATGCCAAGCCAGGCCAACTCTTGGCCATAATGGGTCCTTCTGGTTCTGGCAAGTCCACCCTTCTTGATGCCTTAGCAGAAAGTGCAGATGGTTACATGCATCTAGGACAAGGGCATGCGTTGAGCGCAAAGGCAAAGCAGACAGGAGATATTCTTATCAACGGCCGCAAACAAGCACTGGCTTATGGAACATCGGCATATTTGACACAAGATGATGCAATATTGACCACCTTAACAGTTGGAGAAGCAGTGTACTACTCAGCTCAACTCCAACTTCCTGATTCATTGTCAAAGTCAGAGAAGAAGGAGAGAGCAGAGTTCACTATCAGAGAAATGGGTCTTCAAGATGCCATTCACACCAGAATTAAAGGCATAAGTGGGGGTCAAAAGAGGAGGGTTAGCATCTGCATTGAGATCCTAACTcgcccttcccttctcttccttGATGAACCAACCAGTGGCCTTGACAGTGCTGCTTCCTACTATGTAATGAGCAGGATTGCTAGCTTAAATGAGAAGGATGGCATTCAGAGGACTATTGTTGCATCAATTCATCACCCTAGCACTGAGGTTTTTCAGCTTTTTCACAACCTTTGTCTTCTGTCTTCTGGTCAAGCTGTGTACTTTGGCCCTACTGCTGCTGCAAATGAGTTTTTTGCATCAAATGGTTTCCCCTGCCCTACTCTTCAGAATCCTTCTGATCATTTTGTGAAAACCATCAACAAGGATTTTGAGCAGGAGGATCCTGAGCAAGGATTATCTATAGGACTAGCCACAGAAGAAGCTATTCATATCCTTGTGAAATCGTACAAGTCATCTCCAATCAATCACCAAGTTCAAAAAGAAGTTGCTAAGATAGGAAAAAGGAATTCTAGTGCAATGGAGATGAAAAGCCATGCTCCTTTCTTCAAGCAGTGCATTATTCTTACAAGAAGATCATCTGTGAATATGTATCGCGATGCCGGCTACTACTGGTTACGTCTACTTATCTATGGTGGATTGGCTATAAGTGTAGGTACTATCTTCTATAATATTGGCTCAAGCAGTGAATCAATTCAGGTTAAAGGTTCAATGCTCATGTTTGTAGTCACATTCCTGACTTTCATAACCATTGGTGGTTTCCCTTCCTTTGTGGAGGACATGAAGGTATTTGGAAGAGAAAGATTAAATGGCCATTATGGTGTCACTGCATATGCCATTGGACACACATTTTCTTCTATTCCATACTTGCTATTGATGTCAGTAATTCCTGGAGCACTAGTTTATTACCTAACTGGACTTCACCCAGGAGGCCAACATTTTCTTTACTTCACTTGTGTGCTCTTTGTTTCTGTAATGTTAGTTGAGAGCCTTATGATGATTGTTGCAAGTATAGTTCCCAACTTCTTGATGGGAATAATCACTGGTTCTGGAATTCTGGGAGTAATGATGTTAAATGGCGGATTCTATCGCCTACCTGGCGATCTTCCCAAATTCTTCTGGAGATATCCTTTGTACTACATTTCCATTCACAAGTATGCCTACCAAGGATTGTTCAAGAATGAGTTTGAAGATCTAACATTTACTAACAATCAAGTTGGAGCACCAAGGATAATCAGTGGGAAAGAAATGCTGAGAAATTCTTGGCAAATTGAAGTGGATCACTCCAAGTGGGATGATCTTTCCATCTTGGTAGGAATGGTAGTGCTGTATAGAATTCTGTTCTTGGTCATCATCAAAAGCATTGAGAAGGTGAAGCCTGTTATAGCAGCCTTCAAGTGA 1992 0.4046 MMSCFLKGGDETHNGNWSSRKGQIRSMEEMNEVAIEVAEEEEEEEEKEGICLTWKDVCVTVSTAKEGSKPILQALTGYAKPGQLLAIMGPSGSGKSTLLDALAESADGYMHLGQGHALSAKAKQTGDILINGRKQALAYGTSAYLTQDDAILTTLTVGEAVYYSAQLQLPDSLSKSEKKERAEFTIREMGLQDAIHTRIKGISGGQKRRVSICIEILTRPSLLFLDEPTSGLDSAASYYVMSRIASLNEKDGIQRTIVASIHHPSTEVFQLFHNLCLLSSGQAVYFGPTAAANEFFASNGFPCPTLQNPSDHFVKTINKDFEQEDPEQGLSIGLATEEAIHILVKSYKSSPINHQVQKEVAKIGKRNSSAMEMKSHAPFFKQCIILTRRSSVNMYRDAGYYWLRLLIYGGLAISVGTIFYNIGSSSESIQVKGSMLMFVVTFLTFITIGGFPSFVEDMKVFGRERLNGHYGVTAYAIGHTFSSIPYLLLMSVIPGALVYYLTGLHPGGQHFLYFTCVLFVSVMLVESLMMIVASIVPNFLMGIITGSGILGVMMLNGGFYRLPGDLPKFFWRYPLYYISIHKYAYQGLFKNEFEDLTFTNNQVGAPRIISGKEMLRNSWQIEVDHSKWDDLSILVGMVVLYRILFLVIIKSIEKVKPVIAAFK 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2524 663 Pfam ABC-2 type transporter 262 364 IPR043926 GO:0140359
Sto13g2524 663 SMART AAA_5 81 277 IPR003593 -
Sto13g2524 663 Pfam ABC-2 type transporter 382 593 IPR013525 GO:0016020|GO:0140359
Sto13g2524 663 ProSitePatterns ABC transporters family signature. 202 216 IPR017871 GO:0005524
Sto13g2524 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 294 IPR027417 -
Sto13g2524 663 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 305 IPR003439 GO:0005524
Sto13g2524 663 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 34 660 - -
Sto13g2524 663 MobiDBLite consensus disorder prediction 1 22 - -
Sto13g2524 663 Gene3D - 37 301 IPR027417 -
Sto13g2524 663 Coils Coil 24 48 - -
Sto13g2524 663 Pfam ABC transporter 74 230 IPR003439 GO:0005524
Sto13g2524 663 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 34 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2524 Sto-Chr13 31413573 31416873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2524 68 266 Calmodulin-binding Proteins AT2G36910 27.189 4.26e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2524 13 31413573 31416873 Sto13g2524 13 31413573 31416873 ECH