Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2523 ATGACTTCCCTTCTTCATTCTCAACCAAAAGCTGGTTACTGTGAACCAAATAATAGCTCTAGAGTTATACAACTACAAACCAACCTGGACTTTATCAACCCATTTGAGAACGAAGCCGTGAAACCAACAGAAAGCAGCAAAGACAGTCAGAGAATGATGGATGAGGGAGTTCTCATGACATGGGAGGACTTGTGGGTGACTGTTCCAAATGGAAAGAACAGGAAACCAATTCTGCAGGGTCTGACTGGATATGCCAAGCCAGGACAGCTTTTGGCTATAATGGGTCCTTCAGGCTGTGGAAAAACCACACTCCTTGATGCTTTAGCAGGAAGATTGGGTTCAAACACAAAGCAAACAGGGAAGATTCTAATCAACGGCCATAAACAAGCACTAGCTTATGGAACATCAGCATATGTTACCCAAGATGATGCTATGTTGTCAACTTTGACGGCCAGAGAAGCTTTATACTACTCATCTCTGCTCCAATTGCCGGATTCCATGTCCATAGAAGAGAAGAAGGACAGAGCAGACTTCACACTCAGAGAAATGGGTCTCCAAGATGCCATAAACACAAGGGTTGGAGGGTGGACTTCTAAAGGCCTCAGTGGGGGACAAAAGAGGAGACTTAGTATTTGCATAGAGATTCTGACACGCCCCAGACTTCTCTTCCTTGATGAACCAACTAGTGGGCTTGATAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCCAGTCTAAATCTAAGGGATGGCATTCAAAGGACTATAGTTGCATCCATCCATCAGCCCAGCAGTGAAGTTTTTCAACTTTTCCATAACCTCTGCCTTCTGTCTTGTGGTGAAACAGTATATTTTGGCCCTGCATCTTCTGCAAATGAGTTTTTTGCTTCAAATGGTTTTCCTTGCCCAACTCTCTACAATCCCTCTGATCATTTCTTAAGGATCATAAACACGGATTTTGAACAGgatGTTGAAGAAGGCCTTGGTAAAGGAGTAAACACAGAAGAAGCAATTAATGTCCTTGTGAAGTCCTATCTATCTTCTGAAACTCATAAACAAATTCAGAAAGAAGTGGAAGAAATAAGTGAAAGTGATTCTGGAGCaatagagaagaagagaatCCATGCtgcattttttaatcaatgctTCATTCTTATAAGAAGATCTTCCCTGCATATGTACCGTGACATCAGCAATTACTGGTTACGTCTAGCTGTATATGCTGCAATAGCTCTAAGTCTGGGCACTATATTCTATGACATTGGCTCAAGTTACGGATCTATTCAGGCTAGAGGGTCGCTTCTAACCTTTTTCATTTCCGTCCTTACTTTCATAACTCTCATTGGTGGATTCCCTCCATTTTTGGAGGAAATGAAGGTATTTAAACGAGAGAGATTGAATGGACATTATGGTGTTACTGCTTTTCTCATTGGCAATACATTCTCTGCTGTTCCATACATGCTACTAATTTCTCTAATACCTGGACTTATAGTGTATTACCTTTCTGGGCTACACAAAGGACTTGAACACTTTCTGTACTTAATTGCTGTGCTGTTTGCCACTGTTATGTCCGTTGAGAGCCTCATGATGGTTGTTGGCTGTATCTTCCCCAATTTCATAATGGGCATGATCATTGTTGGAGGAATTCAAGGAGTCATGATCTTAATCGGTGGTTTCTATAGACTGCCAAACGATCTTCCCAAGCCGTTTTGGAGATACCCTTTGTACTACATTTCATTCCACAAGTATGCCTTCCAAGGATTGTTCAAGAATGAATTTGAAGGTTTGACATTTGGTGGGGATCAATATGGAGGCAACAAAACCATTAGTGGTAGAGACATTTTGACAAACACATGGCAGATGGAAATGGGTCACTCGAAGTGGGCTGATCTTGCTATCTTGCTTGGAATGATTGTTCTGTATCGACTTCTCTTCTTGGCCATTTCAAAGAGCAAGGAGAAGGCAAAGCCTATGGTTGCAGCATTCAGATGCCCCCAAGCCAAACTCTTCACTACAGTGACCAGAGGTAACGAGCAGAATTAG 2043 0.4131 MTSLLHSQPKAGYCEPNNSSRVIQLQTNLDFINPFENEAVKPTESSKDSQRMMDEGVLMTWEDLWVTVPNGKNRKPILQGLTGYAKPGQLLAIMGPSGCGKTTLLDALAGRLGSNTKQTGKILINGHKQALAYGTSAYVTQDDAMLSTLTAREALYYSSLLQLPDSMSIEEKKDRADFTLREMGLQDAINTRVGGWTSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLNLRDGIQRTIVASIHQPSSEVFQLFHNLCLLSCGETVYFGPASSANEFFASNGFPCPTLYNPSDHFLRIINTDFEQDVEEGLGKGVNTEEAINVLVKSYLSSETHKQIQKEVEEISESDSGAIEKKRIHAAFFNQCFILIRRSSLHMYRDISNYWLRLAVYAAIALSLGTIFYDIGSSYGSIQARGSLLTFFISVLTFITLIGGFPPFLEEMKVFKRERLNGHYGVTAFLIGNTFSAVPYMLLISLIPGLIVYYLSGLHKGLEHFLYLIAVLFATVMSVESLMMVVGCIFPNFIMGMIIVGGIQGVMILIGGFYRLPNDLPKPFWRYPLYYISFHKYAFQGLFKNEFEGLTFGGDQYGGNKTISGRDILTNTWQMEMGHSKWADLAILLGMIVLYRLLFLAISKSKEKAKPMVAAFRCPQAKLFTTVTRGNEQN 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2523 680 Gene3D - 45 299 IPR027417 -
Sto13g2523 680 Pfam ABC-2 type transporter 381 593 IPR013525 GO:0016020|GO:0140359
Sto13g2523 680 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 8 658 - -
Sto13g2523 680 SMART AAA_5 87 276 IPR003593 -
Sto13g2523 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 294 IPR027417 -
Sto13g2523 680 CDD ABCG_EPDR 56 286 - -
Sto13g2523 680 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 304 IPR003439 GO:0005524
Sto13g2523 680 Pfam ABC transporter 79 229 IPR003439 GO:0005524
Sto13g2523 680 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 8 658 - -
Sto13g2523 680 Pfam ABC-2 type transporter 261 358 IPR043926 GO:0140359
Sto13g2523 680 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2523 Sto-Chr13 31408266 31411310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2523 88 239 Calmodulin-binding Proteins AT2G36910 31.677 1.27e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2523 K05681 - gmx:100790102 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2523 13 31408266 31411310 Sto13g2523 13 31408266 31411310 ECH