Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2521 ATGACTTCCCTTCTTCATTCTCACCCAAAAGCTGCTTACTGTGAACCAAATAATAGCTCTAGAGTTCTACAACTACAAACCAACCCGGACTTTATCAACCCATTTGAGAACGAAGAGACCAAACCAACTGAAAGCAGCAAAGACAGTCAGAGAATGATGGATGAGGGAGTTCTCATGACATGGGAGGACTTGTGGGTGACTGTTCCAAATGGAAAGAACAGGAAACCAATACTGCAGGGTCTGACTGGATATGCCAAGCCAGGACAGCTTTTGGCTATAATGGGACCTTCAGGCTGTGGCAAAACCACACTCCTTGATGCTTTAGCagGAAGATTGGATTCAAGCACAAAGCAAGCAGGGAAGATTCTAATCAACGGCCACAAACAAGCACTAGCTTATGGAACATCAGCATATGTTACCCAAGATGATGCTATGTTGTCAACTTTGACGGCCAGAGAAGCTTTATACTACTCATCTCTGCTCCAATTGCCGGATTCCATGTCCATAGAAGAGAAGAAGGACAGGGCAGACTTCACACTCAGAGAAATGGGTCTCCAAGATGCCATAAACACAAGGGTTGGAGGGTGGACTTCTAAAGGCCTCAGTGGGGGACAAAAGAGGAGACTTAGTATTTGCATAGAGATTCTGACACGCCCCAGACTTCTCTTCCTTGATGAACCAACTAGTGGGCTTGATAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCCAGTCTAAATCTAAGGGATGGCATTCAAAGGACTATAGTTGCATCCATCCATCAGCCCAGCAGTGAAGTTTTTCAACTTTTCCATAACCTCTGCCTTCTGTCTTGTGGTGAAACAGTATATTTTGGCCCTGCATCTTCTGCAAATGAGTTTTTTGCTTCAAATGGTTTTCCTTGCCCAACTCTCTACAATCCCTCTGATCATTTCTTAAGGATCATAAACACGGATTTTGAACAGGATGTTGAAGAAGGCCTTGGTAAAGGAGTAAACACAGAAGAAGCAATTAATATCCTTGTGAAGTCCTATCTATCTTCTGAAATTCATAAACAAATTCAGAAAGAAGTGGAAGAAATAAGTGAAAGTGATTTTGGAGcaatagagaagaagaaaatccaTGCTGCATTTCTAAATCAGAGCCTCATTCTTATAAGAAGATCTTCTCTGCATATGTACCGTGACATCAGCAATTACTGGTTACGTCTAGCTGTATATGCTGCAATAGCTCTAAGTGTGGGTACTATATTCTATGACATTGGCTCAAGTTATGGATCTATTCAGGCTAGAGGGTCGCTTCTAACCTTTTTCATTTCGGTCCTTACTTTCATAACTCTCATTGGTGGATTCCCTCCATTTTTGGAGGAAATGAAGGTATTTAAACGAGAGAGATTGAATGGACATTATGGTGTTACTGCTTTTCTCATTGGCAACACATTCTCTGCTGTTCCATACATGATACTGATTTCTCTGATACCTGGACTCATAATGTATTACCTTTCTGGGCTTCACAAAGGACTTGAACACTTTCTGTACTTAATTGCTGTGCTGTTTGCCACTGTTATGTCCGTTGAGAGCCTCACGATAGTTGTTGGCTGTATCTTCCCCAATTTCATAATGGGCATGATCATTGTTGGAGGAATTCAAGGAATCATGATCTTAATTGGTGGTTTCTATAGACTGCCAAACGATCTTCCCAAGCCATTCTGGAGATACCCCTTGTACTATATTTCATTCCACAAGTATGCCTTCCAAGGATTGTTCAAGAATGAATTTGAAGGTTTAACATTTGGTGGGGATCAGTATGGAGGCAACAAAACCATTAGTGGTAGAGACATTTTGACAAACTCATGGCAGTTGGAAATGGGTCACTCAAAGTGGGTTGATCTTGCTATCATGTTTGGAATGATTGTTCTATATCGACTTCTATTCTTGGCCATTTCAAAGAGCAAGGAGAAGGCAAAGCCTATGGTTGCAGCATTCAGATGCCCCCAAGCCAAACTCTTCGCTACAGTGACCAGAGggtattCAGTATTCACAGCTCCATTGCAGATGGGAGGTAGCCATTAG 2073 0.4139 MTSLLHSHPKAAYCEPNNSSRVLQLQTNPDFINPFENEETKPTESSKDSQRMMDEGVLMTWEDLWVTVPNGKNRKPILQGLTGYAKPGQLLAIMGPSGCGKTTLLDALAGRLDSSTKQAGKILINGHKQALAYGTSAYVTQDDAMLSTLTAREALYYSSLLQLPDSMSIEEKKDRADFTLREMGLQDAINTRVGGWTSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLNLRDGIQRTIVASIHQPSSEVFQLFHNLCLLSCGETVYFGPASSANEFFASNGFPCPTLYNPSDHFLRIINTDFEQDVEEGLGKGVNTEEAINILVKSYLSSEIHKQIQKEVEEISESDFGAIEKKKIHAAFLNQSLILIRRSSLHMYRDISNYWLRLAVYAAIALSVGTIFYDIGSSYGSIQARGSLLTFFISVLTFITLIGGFPPFLEEMKVFKRERLNGHYGVTAFLIGNTFSAVPYMILISLIPGLIMYYLSGLHKGLEHFLYLIAVLFATVMSVESLTIVVGCIFPNFIMGMIIVGGIQGIMILIGGFYRLPNDLPKPFWRYPLYYISFHKYAFQGLFKNEFEGLTFGGDQYGGNKTISGRDILTNSWQLEMGHSKWVDLAIMFGMIVLYRLLFLAISKSKEKAKPMVAAFRCPQAKLFATVTRGYSVFTAPLQMGGSH 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2521 690 Pfam ABC-2 type transporter 381 593 IPR013525 GO:0016020|GO:0140359
Sto13g2521 690 Gene3D - 45 299 IPR027417 -
Sto13g2521 690 Pfam ABC-2 type transporter 261 328 IPR043926 GO:0140359
Sto13g2521 690 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 23 658 - -
Sto13g2521 690 Pfam ABC transporter 79 229 IPR003439 GO:0005524
Sto13g2521 690 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 23 658 - -
Sto13g2521 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 294 IPR027417 -
Sto13g2521 690 SMART AAA_5 87 276 IPR003593 -
Sto13g2521 690 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 304 IPR003439 GO:0005524
Sto13g2521 690 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2521 Sto-Chr13 31396499 31400026 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2521 88 239 Calmodulin-binding Proteins AT2G36910 31.677 7.94e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2521 K05681 - gmx:100790102 942.184