Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2519 ATGAACCCCATGCTACATCCAAATGGTCAGCCTCATTCTAGTGAGTGTGAACCAAACAGGAGCTCTAGAATTCTGTTTAACACCTTAGAATTTGAGACCGCATTAGATATGGAAGCCATCAAATCAACAGAAAACGGTAGAATTGGTGAGGGAGAAGGGGAAGAAGGAGGCATTTTCTTGACTTGGGAGGACCTGTGGGTGACTGTTCCTAATGGGAAGAATGGTAGGAAACCAATTCTTCAAGGCTTAACTGGTTATGCCAAACCAGGACAACTTTTGGCTATAATGGGTCCTTCTGGTTGTGGCAAGTCCACTCTTCTTGATGCTTTGGCAGGAAGACTGGGTTCAAAGTTAAAGCAAACAGGGAAGATTCTAATCAATGGCCATAGACAAGCATTGGCTCACGGAACATCAGCATATGTGACAGAAGACGATGCTATACTGACAACTTTAACTGTTGGAGAAGCAGTGTACTACTCAGCTCAGCTTCAATTGCCAGACACAATGTCCAAATCAGAGAAGAAGGAGAGAGCAGACTTCACAATCAGAGAAATGGGTCTGCAAGATGCCATTAACACAAGAATTGGAGGGTGGGGATCTAAAGGTATTAGTGGGGGGCAAAAGAGGAGAGTCAGCATTTGCATTGAGATCTTAACACACCCAAGACTTCTCTTCCTAGATGAACCCACTAGTGGGCTTGATAGTGCTGCTTCTTATTATGTCATGAGCAGAATTGCAAGCTTGAATCAAGAGGATGGTATTGAAAGGACTATTGTAGCATCAATCCATCAGCCTAGTAATGAAATCTTTCAACTTTTCCACAACCTTTGTCTTCTCTCTTCAGGAGAAACAGTGTACTTTGGCCCTGTCTCTGCTGCAATTAAGTTTTTCGCATCAAATGGCTTTCCCTGCCCAACTCTCCAGAATCCTCCTGATCATTTTGTGAAAACAATAAACAAGGATTTTGAACAGGACCCTGGGAAAGGATTAGATGCAGGACTAACCACAGAAGAAGCCATTCATATCCTTGTAAAATCATACAAGTCATCGGAAATTAGCCATCAAGTTCAAAAGGAAGTAGTTGAAATAAGAATGAGGGAGTTTCAAgcaatggagaagaagagtcATGCTGCTTTCTTTACCCAGTGCCTCATTCTTACAAGGAGATCTTTTGTGAATATGTATCGTGAAGTAGGTTATTACTGGTTACGCCTATTTATCTATAGTGGATTGGCCTTGAGTCTTGGTACCATGTTCTATGATGTTGGCTTAAATAGTGAATCAATTCAGGCCAGAGGCTCACTGCTTGTGTTTGCTGTTACATTCCTGACCTTCGTGACTATTGGTGGATACCCTTCGTTTGTGGAGGACATGAAGGTGTTTGAACGAGAAAGACTTAATGGGCACTATGGTGTCACTGCATTCATCATTGGCAACACATTTTCTGCTGTTCCATTCTTGCTGCTGACCTCACTGATCCCAGGAACACTGATTTTTTACTTGGTGGGCCTTCACCAAGGACTCCAACACTTAATCTACTTCATCGCTGTTCTCTTTGTTTCTGTCTTGCTGGTTGAGAGCCTCATGATGATTGTTGCAAGTCTGGTTCCCAACTTCCTGATGGGCATAATTTGTGGTTCTGGAATTCTGGGAGTGATGATGCTAGATGGTGGATTTTACAGATTACCAAGTGATATTCCCAAAGCATTCTGGAGATACCCTTTGTACTACATTTCCTTTCACAGGTATGCATACCAAGGATTGTTCAAGAATGAGTTTCAAAGCCTAACTTTTACCAGTAATCAAGCTGGAGAGCCTATGACCATTAGTGGGGATGAAATACTGAGAAACTTGTGGCAAGTGGAAATGGGCCATTCAAAGTGGGTGGATATTGCTATCCTGATGGGGATGGTGGTTCTATATAGAATCCTGTTTTTGGTTATCATCAAGAGCATTGAGAAGGTGAAGCCTATGGTTGCTGCTGTCAATTGTTCCCAATCAAATTTGAAGTTCACTAAAGTGACTAGAAGCAATGAGATTGATTGA 2046 0.4179 MNPMLHPNGQPHSSECEPNRSSRILFNTLEFETALDMEAIKSTENGRIGEGEGEEGGIFLTWEDLWVTVPNGKNGRKPILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSKLKQTGKILINGHRQALAHGTSAYVTEDDAILTTLTVGEAVYYSAQLQLPDTMSKSEKKERADFTIREMGLQDAINTRIGGWGSKGISGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYYVMSRIASLNQEDGIERTIVASIHQPSNEIFQLFHNLCLLSSGETVYFGPVSAAIKFFASNGFPCPTLQNPPDHFVKTINKDFEQDPGKGLDAGLTTEEAIHILVKSYKSSEISHQVQKEVVEIRMREFQAMEKKSHAAFFTQCLILTRRSFVNMYREVGYYWLRLFIYSGLALSLGTMFYDVGLNSESIQARGSLLVFAVTFLTFVTIGGYPSFVEDMKVFERERLNGHYGVTAFIIGNTFSAVPFLLLTSLIPGTLIFYLVGLHQGLQHLIYFIAVLFVSVLLVESLMMIVASLVPNFLMGIICGSGILGVMMLDGGFYRLPSDIPKAFWRYPLYYISFHRYAYQGLFKNEFQSLTFTSNQAGEPMTISGDEILRNLWQVEMGHSKWVDIAILMGMVVLYRILFLVIIKSIEKVKPMVAAVNCSQSNLKFTKVTRSNEID 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2519 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 297 IPR027417 -
Sto13g2519 681 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 46 672 - -
Sto13g2519 681 Pfam ABC transporter 81 231 IPR003439 GO:0005524
Sto13g2519 681 ProSitePatterns ABC transporters family signature. 203 217 IPR017871 GO:0005524
Sto13g2519 681 Pfam ABC-2 type transporter 381 593 IPR013525 GO:0016020|GO:0140359
Sto13g2519 681 Pfam ABC-2 type transporter 263 318 IPR043926 GO:0140359
Sto13g2519 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 46 672 - -
Sto13g2519 681 Gene3D - 60 323 IPR027417 -
Sto13g2519 681 SMART AAA_5 89 278 IPR003593 -
Sto13g2519 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 306 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2519 Sto-Chr13 31388198 31392003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2519 79 241 Calmodulin-binding Proteins AT2G36910 26.471 4.18e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2519 K05681 - gmx:100789571 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2519 13 31388198 31392003 Sto13g2519 13 31388198 31392003 ECH