Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto13g2518 | ATGGAAAACGACGACGTCGATATGCAGGCCGCAGACACCAACGAAGCAGATTTGGATGACATGAAGAAGCGCTTGAAGGAAATGGAAGACGAAGCTGCTGCTTTGCGAGAGATGCAGGCCAAGGTAGAGAAGGAGATGAGCTCCGTGCAAGATCCTGCAACTGCTGCTGCAAGTCAGGCCAATAGAGAGGAAGTAGATTCTCGATCTGTCTTTGTAGGCAATGTGATGCTCCCATCTACAAGTTTTCTGGTAGACTATTCATGTACTCCTGAAGAAGTGCAGCAGCATTTCCAATCATGTGGAACGGTGAACAGAGTCACCATTCGCACTGATAAGTTTGGCCAACCCAAGGGTTATGCTTATGTGGAATTCCTTGAAACAGAGGCTGTTCAAGAGGCCCTTCTTCTGAATGAATCTGAACTACATGGTCGCCAATTGAAGGTAACTGCCAAGAGGACCAACATACCAGGGATGAAGCAGTATCGTGGCCGCCGCCCCAATCCTTACATGGGGTTTCGAGGCAGAACTCCATATCCTCCTCCTTTTGCCTATTCTCCATATGGATATGGGAAGGTCGCAAGGTTCAGAATGCCAACAATGCGTTACAGCCCCTACTATTGA | 621 | 0.4831 | MENDDVDMQAADTNEADLDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPATAAASQANREEVDSRSVFVGNVMLPSTSFLVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLETEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRGRRPNPYMGFRGRTPYPPPFAYSPYGYGKVARFRMPTMRYSPYY | 206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto13g2518 | 206 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Sto13g2518 | 206 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 85 | 147 | IPR000504 | GO:0003723 | |
Sto13g2518 | 206 | SUPERFAMILY | RNA-binding domain, RBD | 59 | 175 | IPR035979 | GO:0003676 | |
Sto13g2518 | 206 | Coils | Coil | 11 | 45 | - | - | |
Sto13g2518 | 206 | MobiDBLite | consensus disorder prediction | 42 | 64 | - | - | |
Sto13g2518 | 206 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H | 7 | 202 | - | - | |
Sto13g2518 | 206 | Gene3D | - | 1 | 159 | IPR012677 | - | |
Sto13g2518 | 206 | CDD | RRM_II_PABPs | 69 | 149 | - | - | |
Sto13g2518 | 206 | PANTHER | POLYADENYLATE-BINDING PROTEIN 1-LIKE | 7 | 202 | - | - | |
Sto13g2518 | 206 | SMART | rrm1_1 | 69 | 149 | IPR000504 | GO:0003723 | |
Sto13g2518 | 206 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 68 | 153 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto13g2518 | Sto-Chr13 | 31382585 | 31386865 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto13g2518 | 84 | 148 | Eukaryotic Initiation Factors Gene Family | AT2G36660 | 31.818 | 6.23e-06 | 44.3 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Sto13g2518 | 13 | 31382585 | 31386865 | Sto13g2518 | 13 | 31382585 | 31386865 | CCT | |
Sto13g2518 | 13 | 31382585 | 31386865 | Sto13g2518 | 13 | 31382585 | 31386865 | ECH |