Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2497 ATGAAAGAGATGAGAGAGAAGGTAAGAGTTTGGAAGGTAAGAAAAGTTTGGAGGGTGAGATTGATAGTTGATAGGGTCCCCTCCTCATCCCCAAGCGGCAACCAATATAGAATACTCAATACTGGTTTCGACGAAGTAGTATCAACGACGAAATCTCTCACAGTGGAACCAACGCCGTTATCTCCATCAAATAAACAAGCACAAAATTGCCAAGTCGATAAGACCTATCTCTATTCTGGATTTCTGATATTCTCTTCGTCGCCCACAAAATCACACGTCCCTTTTTTACGCTCTTTCTCTGTGTTTTTCGGTGTTCTTCTGCTGCTTGCGGATCTTTTCCCTCATTCTATTGGGAAATTCGGAGACGTTTTGATCGTCGGGAAAGCTGAGGTGGGGCTGAGTTATATGGATAGTCTTTGTTGCTTCAACTCTGGCAATAAGGCGGATCGAGGCCGTTCTTCATGTAGCTCTGGTAAGGGCAGAAGCCATCAATGCCCGGTCAAGTATGGCTTTAGCCTAGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTGGCAAAGCTTGTCCAGTTCCGAGGACATGAGATTGGGCTTTTTGCTATTTATGATGGGCACTTGGGAGACAGTGTACCAGCCTATCTACAAAAGCATCTCTTTTCTAATATATTAAAGGATGAGGACTTCTGGACTGATCCAAACAGGTGTATTGTTAAAGCTTATGAGACAACAGATCAGGCAATTCTAACTCATAGTCCAGATTTGGGACGAGGTGGATCAACTGCAGTGActgcaattcttttaaataatcAGAAGTTATGGATAGCAAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGACTGGCCGTACAGATGAGTACTGATCACGAGCCCAACAATGAGCGGGGCAGTATTGAGAACAGAGGTGGCTTTGTCTCAAACATTCCAGGAGATGTTGCAAGAGTGAACGGCCAACTTGCAGTTTCTCGAGCATTTGGCGACAAAAACCTAAAATTGCACTTGCGATCTGATCCCGACATTCAGTATACTGACATTAACCCAGATACTGAGTTTCTGATACTTGCCAGTGACGGTCTATGGAAGGTGATGACAAATGAAGAGGCAGTTGATATTGCAAGAAGGATTAAGGATCCACAAAGGGCAGCAAAACAGCTAGTTACTGAGGCGTTGAACCGAGACAGCAAGGACGATATTTCCTGTATTGTAGTTCGTTTCAAGGGATGA 1254 0.4378 MKEMREKVRVWKVRKVWRVRLIVDRVPSSSPSGNQYRILNTGFDEVVSTTKSLTVEPTPLSPSNKQAQNCQVDKTYLYSGFLIFSSSPTKSHVPFLRSFSVFFGVLLLLADLFPHSIGKFGDVLIVGKAEVGLSYMDSLCCFNSGNKADRGRSSCSSGKGRSHQCPVKYGFSLVKGKANHPMEDYHVAKLVQFRGHEIGLFAIYDGHLGDSVPAYLQKHLFSNILKDEDFWTDPNRCIVKAYETTDQAILTHSPDLGRGGSTAVTAILLNNQKLWIANVGDSRAVLSRGGLAVQMSTDHEPNNERGSIENRGGFVSNIPGDVARVNGQLAVSRAFGDKNLKLHLRSDPDIQYTDINPDTEFLILASDGLWKVMTNEEAVDIARRIKDPQRAAKQLVTEALNRDSKDDISCIVVRFKG 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2497 417 Pfam Protein phosphatase 2C 177 408 IPR001932 -
Sto13g2497 417 SMART PP2C_4 164 413 IPR001932 -
Sto13g2497 417 PANTHER PROTEIN PHOSPHATASE 2C 140 416 IPR015655 GO:0004722|GO:0006470
Sto13g2497 417 ProSiteProfiles PPM-type phosphatase domain profile. 168 415 IPR001932 -
Sto13g2497 417 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 140 416 - -
Sto13g2497 417 SUPERFAMILY PP2C-like 162 416 IPR036457 -
Sto13g2497 417 Gene3D - 148 417 IPR036457 -
Sto13g2497 417 CDD PP2Cc 167 415 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2497 Sto-Chr13 31226575 31230259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2497 136 416 PP2C-type Phosphatase Gene Family AT1G22280 70.383 1.62e-143 408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2497 13 31226575 31230259 Sto13g2497 13 31226575 31230259 CCT