Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2495 ATGATTGACGTCAAGACATTAttgtttgatgatgatgatatgtcAACTCTTGCCATAAGACAGGTTGATTGGAAAGATAGGTTAAAAAGGGAAGCTTTCTTCATCCTCTCCTCTTCATTCTCTGGGTTGATCTGTGATTCAGTCTTCATCATGGCGGAACGTGGTTCTTTCGGATTGGCTCCTCGATTAGCCATTTCAACTGGTGAATGGGCTGGTCATCCAATGGTTCACTTTCCATGTCTAATTGGCGGCATTCAAACTCAACACATGATGGAAGTGAGAAAGGAGAGCAACCAATGGTCCATATTACCTATTGATATCCAGCAATTACAATTTGAAGCCCAGCATCGATGGTTGCGGCCTGCtgaaatttgtgaaattcttcGTAATTATCAGATGTTTCATATCACACCAGAACCGCCAAACAGGCCACCAAGTGGTTCACTTTTTCTCTTTGACCGGAAGGTATTGAGATATTTTAGAAAGGATGCACATAAttggagaaagaaaaaagatggAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGCATTGATGTATTACATTGCTACTATGCCCAtggagaagaaaatgaaaattttcagaGGCGAAGCTATTGGTTGCTTGAACAGGATATGATGCATATTGTTTTTGTTCACTACTTGGAAGTTAAGTGGGTTCCATTCTCTCAGGGTAACAAGACAAATATAGGAGGAaaaccaaatattaatgagGTTTCATCAGATTCCCAAAAGGGCAGCTCTGCATCATCTAGTTTTCTGACAAATTATAGTACTGTGCCTTCAAGAAGTACAGATTCCATGAGCCCAACTAGCACTTTGACATCCTTATGTGAAGATGCTGATTCTGGTAATTCTGCATTTCTAAATCTAAGGGCAATGTTGATAATTGACAGTTGTCCAGCATGCTTAAAAATAGAGGATATTCACCAAGCAAATTCTGCATTACGCTTATGTCATGATTCACCTAGTTTGGAAAATGTTCCTCCAATGGACAAGAGTGGTGCAGCTTCGAATAATTCATATCTTCTACATCCCTTTTCAGGTGATCATGGACAGTCATCAATTTCTGGAATTGACTATACTACAGTTCAGAGAGATAAATCTAAACGAAGTTATACTAGTACTTCTttcattgaggaccaaaagacaAATGGAATGGCATTATGGGACAATGTCTTTGTATCACTTCCTTCCATCCCATCCAGTTTAATAGGAAACATTCTTGAACAAGAACATACTGTTCCGGGCGACCCTTTAACCAACAAGAGTGTCCTCACCAGACAGGCAGAGAGCTCTCAGTCATGCCAATCAAATTGCCAGATCCCTTTTGAAAATAATCCAGGACAATTGGTCAAATGGTCCACAACCCAAAcgttgggtttggaatttggatcTGATTTTAGCAATGGCTTGGTGGAACATGAAACACATAGTTCAAGTCCTGACATTGCTCCCGAGTTGGTCACTTATGACGGTCAGCCAAAAGAGGAGCCTGTGCTAGAAAACTTTCCAGATCAGCATACATACACACAATCTCAAATTTTGCTGAAATCCAATTTTGAGAATGAAGTTTCTACTGAAGAAAGTATCAATTATGCCTCAACTGTGAGGCGCACATTATTAAATGGGGAGGAGAGCCTAAAGAAAGTTGACAGCTTTTCTAGATGGATTACTAAAGCACTTGAAGAGGTGGATGATCTTCATATGCAGTCATCGCCTGGTATTTCTTGGAGCACAGATGAATGTGGGCATGTAATAGATGATTCCTCATTGAGCCCCTCCCTGTCTCAGGACCAGCTCTTTAGCATAAATGTTATTTCACCTAAGTGGGCTTATGCTGAATTAGAAACTGAGGTTTTGATAATTGGAACATTTTTGAAGAGTCAATCAGAGGTAGCAAATTATAACTGGTCATGCATGTTTGGGGAAGTGGAGGTTCCTGCTCAGGTTCTAGCCAATGGAATTCTGTGCTGTCATGCTCCACCTCATAAAGCTGGACGGTTCCCCTTCTATGTAACATGCTCCAATAGGTTGGCTTGCAGTGAAGTGCGGGAATTTGATTACACAGATGGCTTTGCTAAAGATGTAGACATTTCAGATTTCTGTAACAGTTCTACTGAAACGCTGCTTCATTTGAGACTGGACAAGTTACTTTCTTCAAAATCAGCATGCTCTTTAAACCACATCGTTGACAGTGATATGGTCAAAAGGAACTTGCTTATTAAGCTTATTTCGCTAAAGGAGGAAGAGGACTTTTCAAACATGGAAGATCCGACATCAGAGATGGATGCATCCCAACACAAAGTGAAGGAGCAATTATTTTACAGGAAGGTTAAAGAGAAGCTATACTCATGGCTGCTTCACAAAGTAACTGAAGATGGTAAAGGGCCAAATGTAGTAGATGAGGAGGGGCAGGGTGTGCTACATTTAGTATCTGCTCTTGGTTGTGATTGGGCAATAATGCCAATTATAACTGCTGGAGTTAATATCAATTTCCGGGATGTGAAAGGATGGACAGCTCTGCATTGGGCTGCATCCTGTGGCAGAGAACGGACTGTTGCTGTACTTGTCTCCATGGATGCAGCTACAGGAGCATTGACAGATCCATCTCCAGAATTTCCTTCTGGTAGAACACCTGCAGATCTTGCTTCTAGCAACGGACACAAAGGAATCTCTGGTTTTCTTGCAGAGTCTTCATTAACAAGCCATCTCTCTTCCCTCACAATGAACGATCTAAAGAAAGACTTTGGGCAAAGAGTTTCAGAAGTGAAAACGGTACAGACAGTTTCAGAACGAATTGCAACACCTGGCGTTTGTGGTGATCCACCCGATGCCCTCTGCCTTAAGGATTCTCTTACTGCTGTTCGTAATGCAACACAAGCTGCTGATCGCATACATCAAGTATTCAGAATGCAGTCGTTTCAGAGGAAGCAGTTGACTCTGCATGAAGATGATGAGTTTGGATTGTCAGATCAGCAAGCTCTTTCCTTGCTAGTTTCTAAAACAGGCAAGGCTGGACAAGGAGAAGGTTTAGCCCATACTGCTGCAGTGCAAATACAGAAAAAGTTTCGTGGTtggaagaagagaaaagaattCCTGATAATTCGTCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCATCAGGTGAGGAAGAAGTATAAATCAATCACCTGGTCTGTAGGAATTCTGGAGAAGGTAATTTTACGATGGAGACGCAAGGGCAGTGGTTTACGTGGGTTTCGACCAGATGCTGCTAATAAGATCACTAACCATCAAAATGATAGTTTGGTGGAAGAGGATGATTATGATTTTCTCAAGGAAGGAAGGAAACAAAGTGAGGAAAGGTTTCAAAAGGCGCTTTGTAGGGTGAAGTCTATGGTTCAGTATCCAGAGGCACGGGCTCAGTACCGGCGTCTGCTAAATGTCGCTGAGGATTTCCGTCAAACCAAGGCATGCAATATGGATGTAATCAATTCAGAAGAAGCAGTTGATGGTGTAGATGACCTTATTGATATTGAGATGCTTTTAGATGATGACAATTTCATACCAATAGCGTTTGATTGA 3603 0.3983 MIDVKTLLFDDDDMSTLAIRQVDWKDRLKREAFFILSSSFSGLICDSVFIMAERGSFGLAPRLAISTGEWAGHPMVHFPCLIGGIQTQHMMEVRKESNQWSILPIDIQQLQFEAQHRWLRPAEICEILRNYQMFHITPEPPNRPPSGSLFLFDRKVLRYFRKDAHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQRRSYWLLEQDMMHIVFVHYLEVKWVPFSQGNKTNIGGKPNINEVSSDSQKGSSASSSFLTNYSTVPSRSTDSMSPTSTLTSLCEDADSGNSAFLNLRAMLIIDSCPACLKIEDIHQANSALRLCHDSPSLENVPPMDKSGAASNNSYLLHPFSGDHGQSSISGIDYTTVQRDKSKRSYTSTSFIEDQKTNGMALWDNVFVSLPSIPSSLIGNILEQEHTVPGDPLTNKSVLTRQAESSQSCQSNCQIPFENNPGQLVKWSTTQTLGLEFGSDFSNGLVEHETHSSSPDIAPELVTYDGQPKEEPVLENFPDQHTYTQSQILLKSNFENEVSTEESINYASTVRRTLLNGEESLKKVDSFSRWITKALEEVDDLHMQSSPGISWSTDECGHVIDDSSLSPSLSQDQLFSINVISPKWAYAELETEVLIIGTFLKSQSEVANYNWSCMFGEVEVPAQVLANGILCCHAPPHKAGRFPFYVTCSNRLACSEVREFDYTDGFAKDVDISDFCNSSTETLLHLRLDKLLSSKSACSLNHIVDSDMVKRNLLIKLISLKEEEDFSNMEDPTSEMDASQHKVKEQLFYRKVKEKLYSWLLHKVTEDGKGPNVVDEEGQGVLHLVSALGCDWAIMPIITAGVNINFRDVKGWTALHWAASCGRERTVAVLVSMDAATGALTDPSPEFPSGRTPADLASSNGHKGISGFLAESSLTSHLSSLTMNDLKKDFGQRVSEVKTVQTVSERIATPGVCGDPPDALCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLTLHEDDEFGLSDQQALSLLVSKTGKAGQGEGLAHTAAVQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKKYKSITWSVGILEKVILRWRRKGSGLRGFRPDAANKITNHQNDSLVEEDDYDFLKEGRKQSEERFQKALCRVKSMVQYPEARAQYRRLLNVAEDFRQTKACNMDVINSEEAVDGVDDLIDIEMLLDDDNFIPIAFD 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2495 1200 ProSiteProfiles IQ motif profile. 1046 1070 IPR000048 GO:0005515
Sto13g2495 1200 SUPERFAMILY Ankyrin repeat 798 908 IPR036770 -
Sto13g2495 1200 Gene3D Immunoglobulins 607 702 IPR013783 -
Sto13g2495 1200 MobiDBLite consensus disorder prediction 240 282 - -
Sto13g2495 1200 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 101 1200 - -
Sto13g2495 1200 SMART CG_1_2 110 228 IPR005559 GO:0003677
Sto13g2495 1200 SMART ANK_2a 847 876 IPR002110 GO:0005515
Sto13g2495 1200 SMART ANK_2a 886 915 IPR002110 GO:0005515
Sto13g2495 1200 SMART iq_5 1022 1044 IPR000048 GO:0005515
Sto13g2495 1200 SMART iq_5 1045 1067 IPR000048 GO:0005515
Sto13g2495 1200 Pfam IQ calmodulin-binding motif 1048 1067 IPR000048 GO:0005515
Sto13g2495 1200 Pfam IQ calmodulin-binding motif 1025 1043 IPR000048 GO:0005515
Sto13g2495 1200 Pfam IPT/TIG domain 614 692 IPR002909 -
Sto13g2495 1200 ProSiteProfiles CG-1 DNA-binding domain profile. 107 233 IPR005559 GO:0003677
Sto13g2495 1200 Pfam CG-1 domain 113 226 IPR005559 GO:0003677
Sto13g2495 1200 Gene3D - 1023 1071 - -
Sto13g2495 1200 ProSiteProfiles IQ motif profile. 1023 1052 IPR000048 GO:0005515
Sto13g2495 1200 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 101 1200 - -
Sto13g2495 1200 Gene3D - 773 916 IPR036770 -
Sto13g2495 1200 SUPERFAMILY E set domains 614 699 IPR014756 -
Sto13g2495 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1023 1073 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2495 Sto-Chr13 31207593 31219990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2495 51 1177 CAMTA Transcription Factor Family AT5G64220 50.570 0.0 1015
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Sto13g2495 CG-1 3.3e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2495 K21596 - gmx:100795682 1482.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2495 13 31207593 31219990 Sto13g2495 13 31207593 31219990 CCT