Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2493 ATGGATTCCACGCAATTGGCGCTTTTTAGGGCTCTGAACCGCCATTTTTTCAGAGCTCCTCTGTGTCAATGCATATCCACGGTTCCTCTCCATCTCAGGCTTAACTGCGTTGCCCACAAGTCTCACTCTTTTGCTTCTTCGCCCTTGCTCAGGAACTTGTGTGCGGTGGTCAACCGACTACCCTGTCGTTCCCAGTGCATTTCGAGCTCCGCTGCTCCGTTTGCTTCTTCTGGCGCTGGAAATGGTGGGGCTGGTGGGGGGAGTGGCGGTGCCGGAGGAGGCGGTGGCGGTGGCAGCAACAGTGCGGGTGGTGATTCTGGAGATGTTAATCCCAAATTGGTTGGTGAAGAACTTTTGGCACCTTCGCCTGATGTTATTATTCTCGACGTTGGGGGAATGGTGTGCGGGGGATGTGCAGCTAGTGTGAAAAGAATCCTAGAAAATAGACCTCAAGTGGCATCTGCTAGTGTAAACCTAGCAACAGAGACAGCAATAGTTTGGCCTATATCCGAAGCAAAAACTGTACCAAATTGGCAAAAGAAATTAGGAGAGGCACTTGCAGAGCATTTGACTAGCTGTGGTTTTAAGTCTAGCCTTCGAGACTCATCAAGAGATAGTTTCCTCCAAGTTTTTGAAAGGAAGTTGGAGGAAAAACGTAGACTGTTGAAAGAAAGTGGTCGCGAATTAGCTGTTTCCTGGGCTTTATGTGCTGTCTGCCTTGTTGGTCACCTCTCTCATTTCCTTGGAGTGAAGGCACCATGGGCCCATGCTTTTCATTCAACTGGGTTTCATCTATCCCTATCTTTGTTTACATTGCTTGGTCCTGGGCGCCAACTTATTCTTGATGGCGTAAAAAGTCTTATTAAAAGGGCACCAAACATGAACACCTTAGTTGGTCTTGGAGCTTTATCATCATTTACTGTCAGTTCATTTGCTGCCTTGCTGCCAAAACTGGGTTGGAAGGCCTTCTTTGAGGAACCAATCATGCTAATTGCATTTGTCTTGCTAGGAAGGAATCTCGAACAGAGAGCTAAAATCAAAGCAACCAGTGATATGACAGGATTGCTTAGTATATTGCCATCAAAAGCTCGTCTTCTGATTAGCAATGACCCAACAGAGTTTGACTCAAGTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGGAGACCGAATTCTTGTGCTGCCTGGAGATCGTATCCCAGCAGATGGAATTGTCAGATCTGGTAGAAGCACTGTAGATGAGTCAAGTTTTACTGGAGAGCCACTGCCAGCAACAAAGTTACCTGGGAGTCAGGTTGCTGCTGGAAGTATAAATCTTAATGGCACTCTTACAATTGATGTGCAGAGACCAGGCAGTGAGACTGCTATGGGAGATATTGTTCGTCTGGTTGAAGAAGCACAAAGTAGGGAAGCTCCAGTACAACGTTTGGCTGACAAGGTTTCTGGCCACTTCACTTGGGGAGTAATGGCAGTTTCTGCTGCCACGTTTACATTCTGGAGTTTGTTTGGCACACACATTCTACCTGCAGCTCTATCTCAAGGAAGTTCAGTCTCTCTGGCATTGCAACTTGCTTGCAGTGTTTTGGTTGTTGCTTGTCCATGTGCACTTGGGTTGGCCACACCGACAGCAGTGTTGGTTGGAACTTCGTTGGGAGCTACAAGGGGATTGCTTTTACGGGGTGGAAACATTCTAGAGAAGTTTTCTATGGTAAATGCTGTTGTGTTTGACAAAACAGGGACCCTCACAATTGGTAGACCTGTTGTGACAAAGATTGTCAATACAAGTGGACAGGACAACAATTCAAGGCAAACTGCTGACAATGCTTGGTCTGATGCTGAAGTTCTGAGGTTAGCTGCTGGAGTGGAATCAAATACAATACATCCAATTGGCAAAGCAATTGTGGAAGCTGCTCAGGCAGTCAATTGTGATTATGCAAAGGTAACAGATGGAACATTCTTGGAAGAACCTGGATCTGGTGCAGTAGCAACCATTGATAACAATAAGGTTTCTGTTGGGACTTTGGAATGGGTGACAAGGCAAGGAGTTAACAAAAATATTCATCAAGAAGTGGAGGAGTGTAGAAATCAGTCTGTTGTTTATGTTGGAGTTAATGATACTCTAGCTGGCCTTATTTATTTTGAAGATCAGATAAGGGAAGATGCAAGACATGTTGTTGAATCCTTGTCTAAGCAAGGAATTGGTGTTTACATGCTCTCTGGAGACAAAAGGAGTACGGCTGAGTATGTTGCATCTGTTGTTGGAATACCTAAAGAGAGGGTGCTTTCTGGAGTGAAacctgatgaaaaaaagaagttcATAAATGAACTCCAGAAGGATCAGAAAATTGTAGCTATGGTTGGCGATGGGATCAATGATGCAGCTGCCTTGGCTTCGTCACATATTGGTATTGCATTAGGTGGAGGTGTTGGAGCTGCAAGTGAGGTGTCTTCAATTGTACTGATGGGCAACAGGATCTCACAGCTGCTTGATGCATTGGATCTCAGTAGGCTAACCATGAAGACTGTGAAACAAAATCTTGGCTGGGCTTTCCTCTACAACATTGTTGGAATTCCTATTGCAGCCGGATTGTTATTTCCAGTAAATGGGACCATGTTGACTCCATCAATTGCTGGGGCTCTCATGGGATTGAGTTCCATTGGTGTAATGACAAACTCATTACTTCTGAGATTCAGATTTTCCACAAAGCAAAAACAGACACATGGGGTATCCCCAAGGACCGAAGCCCATGTGGATAATGATCTTGTAGatcaaaaaggaaaattaaagtATGGACAATAA 2799 0.4448 MDSTQLALFRALNRHFFRAPLCQCISTVPLHLRLNCVAHKSHSFASSPLLRNLCAVVNRLPCRSQCISSSAAPFASSGAGNGGAGGGSGGAGGGGGGGSNSAGGDSGDVNPKLVGEELLAPSPDVIILDVGGMVCGGCAASVKRILENRPQVASASVNLATETAIVWPISEAKTVPNWQKKLGEALAEHLTSCGFKSSLRDSSRDSFLQVFERKLEEKRRLLKESGRELAVSWALCAVCLVGHLSHFLGVKAPWAHAFHSTGFHLSLSLFTLLGPGRQLILDGVKSLIKRAPNMNTLVGLGALSSFTVSSFAALLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLISNDPTEFDSSVEVPSDSLSVGDRILVLPGDRIPADGIVRSGRSTVDESSFTGEPLPATKLPGSQVAAGSINLNGTLTIDVQRPGSETAMGDIVRLVEEAQSREAPVQRLADKVSGHFTWGVMAVSAATFTFWSLFGTHILPAALSQGSSVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGATRGLLLRGGNILEKFSMVNAVVFDKTGTLTIGRPVVTKIVNTSGQDNNSRQTADNAWSDAEVLRLAAGVESNTIHPIGKAIVEAAQAVNCDYAKVTDGTFLEEPGSGAVATIDNNKVSVGTLEWVTRQGVNKNIHQEVEECRNQSVVYVGVNDTLAGLIYFEDQIREDARHVVESLSKQGIGVYMLSGDKRSTAEYVASVVGIPKERVLSGVKPDEKKKFINELQKDQKIVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMGNRISQLLDALDLSRLTMKTVKQNLGWAFLYNIVGIPIAAGLLFPVNGTMLTPSIAGALMGLSSIGVMTNSLLLRFRFSTKQKQTHGVSPRTEAHVDNDLVDQKGKLKYGQ 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2493 932 PRINTS P-type cation-transporting ATPase superfamily signature 413 427 - -
Sto13g2493 932 PRINTS P-type cation-transporting ATPase superfamily signature 574 588 - -
Sto13g2493 932 PRINTS P-type cation-transporting ATPase superfamily signature 709 720 - -
Sto13g2493 932 PRINTS P-type cation-transporting ATPase superfamily signature 731 741 - -
Sto13g2493 932 PRINTS P-type cation-transporting ATPase superfamily signature 786 805 - -
Sto13g2493 932 PRINTS P-type cation-transporting ATPase superfamily signature 809 821 - -
Sto13g2493 932 Pfam E1-E2 ATPase 359 552 - -
Sto13g2493 932 SFLD p-type atpase 557 836 IPR044492 -
Sto13g2493 932 ProSitePatterns Heavy-metal-associated domain. 130 159 IPR017969 GO:0046872
Sto13g2493 932 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 294 895 IPR027256 GO:0006812|GO:0016021|GO:0019829
Sto13g2493 932 SUPERFAMILY Calcium ATPase, transduction domain A 377 463 IPR008250 -
Sto13g2493 932 PRINTS Copper-transporting ATPase signature 279 298 - -
Sto13g2493 932 PRINTS Copper-transporting ATPase signature 327 346 - -
Sto13g2493 932 PRINTS Copper-transporting ATPase signature 557 572 - -
Sto13g2493 932 PRINTS Copper-transporting ATPase signature 763 780 - -
Sto13g2493 932 Gene3D - 565 836 IPR023214 -
Sto13g2493 932 Gene3D - 125 202 - -
Sto13g2493 932 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 376 595 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto13g2493 932 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 621 865 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto13g2493 932 CDD HMA 128 183 IPR006121 GO:0046872
Sto13g2493 932 SUPERFAMILY HAD-like 573 893 IPR036412 -
Sto13g2493 932 Pfam Heavy-metal-associated domain 128 195 IPR006121 GO:0046872
Sto13g2493 932 SUPERFAMILY Calcium ATPase, transmembrane domain M 329 860 IPR023298 -
Sto13g2493 932 Pfam haloacid dehalogenase-like hydrolase 570 798 - -
Sto13g2493 932 CDD P-type_ATPase_HM 229 894 - -
Sto13g2493 932 PANTHER ATP7, ISOFORM B 121 897 - -
Sto13g2493 932 Gene3D - 344 467 - -
Sto13g2493 932 ProSitePatterns E1-E2 ATPases phosphorylation site. 576 582 IPR018303 -
Sto13g2493 932 Coils Coil 208 228 - -
Sto13g2493 932 SFLD C1.7: P-type atpase like 557 836 - -
Sto13g2493 932 TIGRFAM ATPase-IB1_Cu: copper-translocating P-type ATPase 276 896 - -
Sto13g2493 932 SUPERFAMILY HMA, heavy metal-associated domain 125 175 IPR036163 GO:0046872
Sto13g2493 932 ProSiteProfiles Heavy-metal-associated domain profile. 125 199 IPR006121 GO:0046872
Sto13g2493 932 MobiDBLite consensus disorder prediction 78 107 - -
Sto13g2493 932 Gene3D - 585 717 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2493 Sto-Chr13 31183360 31197475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2493 285 907 Primary Pumps ATPases AT1G63440 38.485 9.56e-121 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2493 K17686 - gmx:100796210 1306.2