Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2488 atGGAAGCTGATATAGTTGGGAAAGCCTCACCATATCTTCTGATGTTGCAATCCAAATCTATGGTGCTCAAGGCCCTCCTATGCCTTTCTCTCATCTCCTTCTTTTCTTGCATGAATAAGCAACATTTTGCTTTAGCAGCTTCTGTTTCTTCAAACCCAGAAACAAAGGAAGAAGCAGAAGCACTTCTGAGATGGAAAACTAGCCTCTCTAACACAAGTCAAGATTTCCTTTCTTCATGGTCTCTCTCTGGCAGGCCCTGCAATTGGTTAGGCATCACTTGCAATGAAGCTGGAAGTGTCAAAGGCTTAAACCTAACCAGTATTGGCTTGAGAGGTACTCTGGATGATTTCAAATTCTCGTCTTTATCCAACTTGTCTTTTCTTGATCTTCATGATAATGAGCTGTTTGGAAATGTTCCTTCACACATAAGCAATCTTTCCAAAATCACTTTTCTCCATCTGGGTTTCAACCAATTCACAGGAAGAATCCCTCACGAAGTAGGAAAGTTGGTGAAGCTCAATGTGTTGAGCTTATCAACCAACTTTCTTCAGGGTTCTATTCCTTCATCTATTGGAAAATTGACCAATCTTTCTACATTACACCTTGGCATCAATCAGCTTTCTGGTTTTATCCCTCCAGAACTTGGAAAATTGAAGTCTCTTAGAGAGCTTCGGTTGAATCTAAACAACTTGACAGGCTCAATTCCTGCTTCCATTGGAGAATTGATTGGCCTGAAAGTTCTTTCACTCTATGGAAACCAACTCTCAGGTCCACTTCCTCAAGGGATCAATAACCTCACCAATTTGACattatttttcttgtcaaaCAATAGTTTCTCTGGGCCATTACCACAAACTATATGCCATGGTGGAATCCTTCAGGATTTCTGTGCAAGTAATAATCGTTTCGTAGGAACAGTTCCTAAAGGTTTGAAAAACTGCACTAGCCTAACAAGACTAAGGCTTGACAGGAACAACCTCATTGGAAATGTATCTGAAGACTTTGGAATATACCCAAACCTTGATTACATTGATCTGAGCTACAATAACTTTCATGGTGAAGTTTCCCCAAACTGGGCGAAATGTCAGCTTCTTACAAGCTTAAAAATGTCTGACAACCTTATTTCTGGAGAGATACCACCAGAGCTTGGAGAGTCATCACTTTTACATGTGCTGGACCTCTCTTCAAACAATCTTGTGGGTAAAATCCCAAATGAATTGGGAAAACTGAAATCACTGTTCAATCTTACTCTGAGCAATAACAATCTCTCAGGCGCGATTCCAACACAACTTGGAACTTTGCCTGATCTTGCTTATCTTGATCTTGCAGCAAACAAGCTGAGTGGCCCTATACCAAGGGAGCTTGGTGATTGTTCAAAAATGTACTACTTGAGTTTGGGAAACAATGAATTACATGGAAGCATTCCCTTTGAAATAGTCCATTTGATATCACTGCAAGTCCTATTGAATCTTAGTAGGAACTGGCTTACTGGTGAGATTCCATGGCAGTTTGGGAACCTTCTCAAATTAGAAGTGTTGGATTTTTCACACAACAAACTCAGAGGTTCCATACCATCCTCTTTTGAACATATGCAGAGTTTAAGAGCAGTGAATTTCTCCTACAATGACTTGGAGGGCCCAATCCCAAGCAGCAAAGTCTTTGAAGAAGCACCCATTGAagcatttcaaaataataaaggtTTGTGTGGGAACCATTCTGGCTTGAAAACCTGTCCTCCTCTTCAGAATCAGAAGGACCAATGTAGTGTTCTTCTGATTGTCACTCCTATAGTTGGAGCTTCAGTACTATTGAGCATTATCATTTGTGTTGCTTGTATCTTGTATAAAGGTAGGAAAAAGTCAGGCAATGAGTTGAGAGACTCTAGCCAAAGCAATCTTTTTTCCATTTGGAGCTATGATGGGAAACTAGTTTATGAAGATATCAGGGAAGCGACTGAAGGCTTTGATATGAAGTACTGCATAGGAGTTGGAGGACATGGAAGTGTCTATAAGGCAGAGCTTTCAACAGGACAGGTAGTTGCTGTTAAGAAGCTTCATTCCTGTCTGTACTCTGAGTTAGAGAAGAAAACTTTCAAGAGTGAAATATGGGCACTGACAAAAATTCGCCACCGAAACATCGTGAAGCTTCTCGGTTTTTGCTCTCATTCTCAGGAATCCTTTCTGGTATATGAATACTTGGAGAGAGGAAGCTTAGCCAACATGTTCAAGGATCTAAGACAAGCACAAGACTTGGACTGGACTAAGAGAATCAACATCATCAAAGGAGTCTCCAATGCTCTCTACTATCTGCATCATGATTGCAAACCATCAATGATTCACAGGGACATCTCAAGCAGCAATATACTTCTTGATGCAAATTATGAAGCTCGTCTTTCGGATTTCGGCACGGCTAGAGTTGTTAAGCATGACTGTATAGAGCTGACAGGACTTGCAGGAACCTATGGTTATATGGCCCCAGAGCTTGCTTACACCACAAAAGTGACAGAGAAGTGTGATGTGTATGGATTCGGGAACATGCTGCTGAAAGATTTGTTGGACAAGCGCCTCGAGGATCCCACACCTGAAGTGGCCGAGGAAATCCTCACCATCATGAAACTAGCATTCACATGCATAGATGTCAATCCACAAGTGGCTCGGCAATCAACAGAAACCAGGACAGCTGGCAGCCATCATCAGTGCCAAGCATTTATACCATTGCCAACCCGACCCCAGCAAACAGGGCAGCAACAGCCAGCTACAGGCAGTTATTTGTTAGTTCTTCAAATTACTCACGAACACACGCATATCATACAAAAGATGCATCAGCCACGACCTCACAGCAAGTCACGAAGCCATGTGCTACAACAAACATCTCACTACATTAAGTAG 2889 0.4133 MEADIVGKASPYLLMLQSKSMVLKALLCLSLISFFSCMNKQHFALAASVSSNPETKEEAEALLRWKTSLSNTSQDFLSSWSLSGRPCNWLGITCNEAGSVKGLNLTSIGLRGTLDDFKFSSLSNLSFLDLHDNELFGNVPSHISNLSKITFLHLGFNQFTGRIPHEVGKLVKLNVLSLSTNFLQGSIPSSIGKLTNLSTLHLGINQLSGFIPPELGKLKSLRELRLNLNNLTGSIPASIGELIGLKVLSLYGNQLSGPLPQGINNLTNLTLFFLSNNSFSGPLPQTICHGGILQDFCASNNRFVGTVPKGLKNCTSLTRLRLDRNNLIGNVSEDFGIYPNLDYIDLSYNNFHGEVSPNWAKCQLLTSLKMSDNLISGEIPPELGESSLLHVLDLSSNNLVGKIPNELGKLKSLFNLTLSNNNLSGAIPTQLGTLPDLAYLDLAANKLSGPIPRELGDCSKMYYLSLGNNELHGSIPFEIVHLISLQVLLNLSRNWLTGEIPWQFGNLLKLEVLDFSHNKLRGSIPSSFEHMQSLRAVNFSYNDLEGPIPSSKVFEEAPIEAFQNNKGLCGNHSGLKTCPPLQNQKDQCSVLLIVTPIVGASVLLSIIICVACILYKGRKKSGNELRDSSQSNLFSIWSYDGKLVYEDIREATEGFDMKYCIGVGGHGSVYKAELSTGQVVAVKKLHSCLYSELEKKTFKSEIWALTKIRHRNIVKLLGFCSHSQESFLVYEYLERGSLANMFKDLRQAQDLDWTKRINIIKGVSNALYYLHHDCKPSMIHRDISSSNILLDANYEARLSDFGTARVVKHDCIELTGLAGTYGYMAPELAYTTKVTEKCDVYGFGNMLLKDLLDKRLEDPTPEVAEEILTIMKLAFTCIDVNPQVARQSTETRTAGSHHQCQAFIPLPTRPQQTGQQQPATGSYLLVLQITHEHTHIIQKMHQPRPHSKSRSHVLQQTSHYIK 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2488 962 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE ISOFORM X1 21 845 - -
Sto13g2488 962 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE ISOFORM X1 845 885 - -
Sto13g2488 962 Pfam Leucine rich repeat N-terminal domain 56 95 IPR013210 -
Sto13g2488 962 Pfam Protein kinase domain 660 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2488 962 Gene3D Transferase(Phosphotransferase) domain 1 733 901 - -
Sto13g2488 962 Pfam Leucine Rich Repeat 389 410 IPR001611 GO:0005515
Sto13g2488 962 Gene3D Phosphorylase Kinase; domain 1 617 732 - -
Sto13g2488 962 SUPERFAMILY Protein kinase-like (PK-like) 632 860 IPR011009 -
Sto13g2488 962 MobiDBLite consensus disorder prediction 938 962 - -
Sto13g2488 962 SUPERFAMILY L domain-like 312 570 - -
Sto13g2488 962 ProSitePatterns Tyrosine protein kinases specific active-site signature. 778 790 IPR008266 GO:0004672|GO:0006468
Sto13g2488 962 SMART LRR_typ_2 194 217 IPR003591 -
Sto13g2488 962 SMART LRR_typ_2 122 146 IPR003591 -
Sto13g2488 962 SMART LRR_typ_2 218 242 IPR003591 -
Sto13g2488 962 SMART LRR_typ_2 266 290 IPR003591 -
Sto13g2488 962 SMART LRR_typ_2 507 530 IPR003591 -
Sto13g2488 962 SMART LRR_typ_2 410 434 IPR003591 -
Sto13g2488 962 Gene3D Ribonuclease Inhibitor 219 290 IPR032675 -
Sto13g2488 962 SUPERFAMILY L domain-like 57 341 - -
Sto13g2488 962 SMART LRR_sd22_2 242 268 - -
Sto13g2488 962 SMART LRR_sd22_2 122 148 - -
Sto13g2488 962 SMART LRR_sd22_2 170 199 - -
Sto13g2488 962 SMART LRR_sd22_2 507 530 - -
Sto13g2488 962 Gene3D Ribonuclease Inhibitor 291 587 IPR032675 -
Sto13g2488 962 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 21 845 - -
Sto13g2488 962 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 845 885 - -
Sto13g2488 962 ProSitePatterns Protein kinases ATP-binding region signature. 661 684 IPR017441 GO:0005524
Sto13g2488 962 Gene3D Ribonuclease Inhibitor 55 214 IPR032675 -
Sto13g2488 962 Pfam Leucine rich repeat 489 544 IPR001611 GO:0005515
Sto13g2488 962 ProSiteProfiles Protein kinase domain profile. 655 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2488 Sto-Chr13 31154522 31161554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2488 118 826 Receptor kinase-like Gene Family AT4G08850 47.083 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto13g2488 Pkinase 2.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2488 - - qsu:112022436 1112.44