Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2475 ATGGCTGGTGCTGCAACATCTGGTGCTGTGTTGAATGGGTTGACATCTTCCTTCTTGTGTGGGGGAAAGAGGACACAATCCCTTTTGGGTGCTAAAGTAGgtgctgcttctgcttctgctgctACTCCCAAGAAGTTCATTgtagctgctgctgctgctcctAAGAAGTCTTGGGTCCCTGGTGTTAGAGGTGGAGGCAATTTGATCGACCCCGAATGGCTCGATGGCTCACTACCTGGTGACTATGGCTTTGACCCACTTGGCCTAGGCAAGGACCCAGCATTCCTCAAATGGTACAGAGAAGCAGAGCTCATCCATGGGCGGTGGGCAATGACTGCAGTTGTAGGCATCTTTGTTGGTCAAGCTTGGAGTGGAATTCCATGGTTTGAGGCCGGAGCTGAGCCTTCCGCCATTGCTCCTTTCTCCTTCGGTTCTCTTTTGGGCACCCAGTTGCTCCTCATGGGGTGGGTGGAGAGCAAGAGGTGGGTGGACTTCTTCAACCCTGATTCACAATCTGTGGAGTGGGCCACACCTTGGTCAAGAACCGCCGAGAACTTCTCCAATGCCACCGGTGACCAGGGCTACCCGGGCGGCAAATTCTTCGACCCATTGGGCTTGGCCGGCACAATCAAGGATGGGGTTTACATTCCTGACAGAGACAAGCTGGAGAGACTGAAACTTGCTGAGATCAAGCATGCTAGGATTGCTATGTTGGCTATGCTGATCTTCTACTTTGAAGCTGGACAAGGGAAGACACCCCTTGGTGCTCTTGGCTTGTAA 780 0.4949 MAGAATSGAVLNGLTSSFLCGGKRTQSLLGAKVGAASASAATPKKFIVAAAAAPKKSWVPGVRGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVVGIFVGQAWSGIPWFEAGAEPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFSNATGDQGYPGGKFFDPLGLAGTIKDGVYIPDRDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2475 259 Pfam Chlorophyll A-B binding protein 71 247 IPR022796 -
Sto13g2475 259 Gene3D Chlorophyll a/b binding protein domain 71 258 - -
Sto13g2475 259 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 4 259 - -
Sto13g2475 259 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 259 IPR001344 GO:0009765|GO:0016020
Sto13g2475 259 SUPERFAMILY Chlorophyll a-b binding protein 69 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2475 Sto-Chr13 31069103 31070321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2475 5 259 Chloroplast and Mitochondria Gene Families AT1G15820 80.000 5.46e-151 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2475 K08917 - cpap:110816068 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2475 13 31069103 31070321 Sto13g2475 13 31069103 31070321 CCT