Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2463 ATGTTTGTAGCCTCAGATATCAATTTTGTACAAAATGGGTTTCTCCCAGGGAGCTTGAACCTTGAAGGGTCTTCTTATGTGAGATCAAATGGCATACTTACCTTGACAAATAGCTCCTCCAAGATCCTTGGCCATGCATTCTATCCATCTCCTTTACCATtcaaaaaatctattcaaaataaaTCTGAAGTAGTAACCTTCAGCACTACCTTTGTGTTTTCCATTGTTCCCAAATACCCTGACCTTGGAGGACATGGCCTTGCATTCGTCCTAATATCCACCAAAGACCCAAAAGGCTGCCTTGTGAACCAATACATGGGGCTTCCAAATGAGACAAGCTGCCTGGAATTCTCTACCCTGTACCTGGCAGTAGAGTTCGACGCAATACAGAATCCTGAACTAGAGGACATCAACGATAATCATGTGGGCATAGATATCTCCAGCCTCATCTCTAACATATCTAAGCCAGCAATATACTACTCAAGCGATGGCAGCAAGAACACTTCCATCAGTCTCAAAAGTGGTCGAGTCATTCAAGCCTGGGTTGATTACAATGAAGAGGAGAAGTTGATGAATGTAACAATCTCTCCTTTTGGCATTCTCAAGCCAAGTCATCCTCTCATATCTTATCCTATAGACCTATCCTCAGTGTTGAATGACAACATGTATGCAGGTTTTTCTGCTTCCAATGGTTTACTAATAGCTGATTATAATATTCATGGTTGGAGCTTTAGGCTTGGAGGAAAAGCACAGGATCTGGATAAGTCATCTCTTCCACTCACTCAGTCAAGAAGTTCCAATGAGGTAGTGCACCAGAAGGGGTTTGCAGTAGGCATCACTTTTGCGAGTGCAATTCTTTTTATCTTGGTAATTGCCGGAGCTCTTCATGTCCTGCGCAGAATAAGAACCCAAGATGAGATTTTAGAAGACTGGGAACTCGAATATGGAGCTCTAAGATTTAAATATTCCGAGCTGCATTCAGCAACAGGAGGGTTTGGGGAGAAAAACCTTATTGGGTATGGAGGATTTGGAAAAGTTTACAGAGGTGTAATCCGTTGCACAGGACTAGAAGTGGCTGTGAAGCGGGTTGCTCCGGATTCAAGACAGGGAATGAAAGAATTTGTTGCAGAGATAACAAGCATGGGACGAATAAGGCATAGAAACCTTGTGCAGTTACATGGGTGGTGCCGGAGGCATCATGAACTCCTTCTTATTTATGACTATGTTCCAAATGGTAGCCTAGACAGGCTTCTGTTTGAAAATGAGTATCAAAAGAAGAAAATTCTAACTTGGGATGTAAGGTACAAGATTGTTACTGGTGTTGCAAAAGCACTGCTGTATCTCCATGAAGAATGTGACCTACGGGTTGTTCACAGAGATGTGAAGCCAAGCAATGTGTTGATAGATGCAGATTTCCAACCAAAGCTTGGTGATTTTGGTCTTGCAAAGACTAGTGAGCATGGGATCCATCCAAAGACAACCCATATAGTGGGAACATTAGGGTACATGGCTCCTGAGCTCACAAAAACTGGGAAAGCCACAACAAGCACAGATGTATATGGATATGGCATACTCATTTTGGAAGTAGTTTCTGGAAGGCGAGCAATAGAGCCGCAAAAGAATGCTGGGGAACTGGTACTGGTGGACTGGGTAAGGGTACTACATTCCAAAGAGGAGACCACTAGAGCTGTTGATCCAAGTTTAGATGCTTATGACAAAGAGGAAGCTGATCTAGTGCTCACTCTAGGATTGCTTTGCTCTCATCCTCATCCTGATTGCAGGCCAAGTATGAGAAGGATTGTTCAGTTCCTTATGGGAGATGCTGGCCTTCCTCCACTTCCTCTTGACATTCACTGTCAAGTTCCCAGGTCAATAACGGCATACACAGATAATTTTCAAGATGATTCTGACGCTTCAAGTTCTAGAATGTCCTCATTAAAGAGCTGTAGTCATACGAGCTTTGACAAGGTGGTATTTGCTAATCATGTCGAGAGAGCTGTCTCCGACATTGTTCAACTGAAACCCTATGAGAGCTCTAGCGAGGGCGCTCTAGCCACCAGACCATGA 2067 0.4315 MFVASDINFVQNGFLPGSLNLEGSSYVRSNGILTLTNSSSKILGHAFYPSPLPFKKSIQNKSEVVTFSTTFVFSIVPKYPDLGGHGLAFVLISTKDPKGCLVNQYMGLPNETSCLEFSTLYLAVEFDAIQNPELEDINDNHVGIDISSLISNISKPAIYYSSDGSKNTSISLKSGRVIQAWVDYNEEEKLMNVTISPFGILKPSHPLISYPIDLSSVLNDNMYAGFSASNGLLIADYNIHGWSFRLGGKAQDLDKSSLPLTQSRSSNEVVHQKGFAVGITFASAILFILVIAGALHVLRRIRTQDEILEDWELEYGALRFKYSELHSATGGFGEKNLIGYGGFGKVYRGVIRCTGLEVAVKRVAPDSRQGMKEFVAEITSMGRIRHRNLVQLHGWCRRHHELLLIYDYVPNGSLDRLLFENEYQKKKILTWDVRYKIVTGVAKALLYLHEECDLRVVHRDVKPSNVLIDADFQPKLGDFGLAKTSEHGIHPKTTHIVGTLGYMAPELTKTGKATTSTDVYGYGILILEVVSGRRAIEPQKNAGELVLVDWVRVLHSKEETTRAVDPSLDAYDKEEADLVLTLGLLCSHPHPDCRPSMRRIVQFLMGDAGLPPLPLDIHCQVPRSITAYTDNFQDDSDASSSRMSSLKSCSHTSFDKVVFANHVERAVSDIVQLKPYESSSEGALATRP 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2463 688 Gene3D Phosphorylase Kinase; domain 1 318 408 - -
Sto13g2463 688 SUPERFAMILY Protein kinase-like (PK-like) 314 637 IPR011009 -
Sto13g2463 688 SMART serkin_6 332 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2463 688 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.2-LIKE 41 644 - -
Sto13g2463 688 Gene3D Transferase(Phosphotransferase) domain 1 409 608 - -
Sto13g2463 688 CDD lectin_legume_LecRK_Arcelin_ConA 7 248 IPR001220 GO:0030246
Sto13g2463 688 PANTHER - 41 644 - -
Sto13g2463 688 SUPERFAMILY Concanavalin A-like lectins/glucanases 5 260 IPR013320 -
Sto13g2463 688 ProSiteProfiles Protein kinase domain profile. 332 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2463 688 Pfam Legume lectin domain 7 258 IPR001220 GO:0030246
Sto13g2463 688 Gene3D - 5 256 - -
Sto13g2463 688 Pfam Protein kinase domain 334 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2463 688 CDD STKc_IRAK 338 606 - -
Sto13g2463 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Sto13g2463 688 ProSitePatterns Protein kinases ATP-binding region signature. 338 361 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2463 Sto-Chr13 30982876 30986526 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2463 6 604 Receptor kinase-like Gene Family AT3G55550 47.595 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto13g2463 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2463 - - gmx:100801966 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2463 13 30982876 30986526 Sto13g2463 13 30982876 30986526 ECH