Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2460 ATGGCGTTTGTGATGGTGGGAGGACTGATATTCAcaatgttgatgatgatgagttGCAAAGGGCAGCTTCAAGTGGGTTTCTACTCCCAAACATGTCCGCATGCTGAGTCCATTGTGAGATCCGTGGTTGCAGATGCCCTTCGCTCTGACCCCACCATGCCTGCCGTTTTACTCAGGCTTCACTTCCACGACTGCTTTGTTGAGGGGTGTGACGGTTCGATTCTGATAGAGAATGGTGAAGAAGCAGAGAAACGTGCGTTCGGGCATCAAGGGGTGAGAGGGTTTGATGTGATAGAAAGAGCCAAGGCACAATTGGAACAGTCATGCCCTGGACTTGTTTCTTGTGCGGACATTGTTGCTTTAGCAGCTAGAGACGCTGTCTTCATGGCTGATGGACCATTATACCAAGTCCCAACAGGGAGAAGAGATGGATTGGTTTCCAATGTAACACTTGCAGATGACATGCCAGAAGTTTCTGACTCCATTTTCTTACTCAAGGACAAGTTTCTAAACAAAGGCCTCACACCTAAAGACCTTGTACTTCTTAGTGCTGCTCATACAATAGGAAGCACGGCCTGCTTCTTCATGACCAGGAGGCTCTACAACTTTGTGCCTGGTGGAGGAACTGACCCTTCTATAAGGCCGGATTTCCTGCCGTCGCTGACGAATCGGTGCCCGGAGAACGGAGATGTCAACGTCAGGCTGGCCATGGACGTAGGGAGTGAACAGAAATTTGACATAAACATATTGAGGAATATCAGAGAAGGTCTTGCTGTGCTTGAGTCTGATGCTAGGCTTTCTGATGATATGTTCACCAAGAATGTGATTGACTCATACTTTAGTGATTTCGGCCCATCTTTTGAGTCTGATTTTGTTGATTCTATCATTAAGATGGGCCAAATTGGAGTTAAGACCGGTTTATCTGGAGAGATTAGGCGCACCTGctcttcatttaattaa 960 0.4573 MAFVMVGGLIFTMLMMMSCKGQLQVGFYSQTCPHAESIVRSVVADALRSDPTMPAVLLRLHFHDCFVEGCDGSILIENGEEAEKRAFGHQGVRGFDVIERAKAQLEQSCPGLVSCADIVALAARDAVFMADGPLYQVPTGRRDGLVSNVTLADDMPEVSDSIFLLKDKFLNKGLTPKDLVLLSAAHTIGSTACFFMTRRLYNFVPGGGTDPSIRPDFLPSLTNRCPENGDVNVRLAMDVGSEQKFDINILRNIREGLAVLESDARLSDDMFTKNVIDSYFSDFGPSFESDFVDSIIKMGQIGVKTGLSGEIRRTCSSFN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2460 319 Gene3D - 26 319 - -
Sto13g2460 319 SUPERFAMILY Heme-dependent peroxidases 22 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 Pfam Peroxidase 39 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 Gene3D Peroxidase, domain 2 156 298 - -
Sto13g2460 319 ProSiteProfiles Plant heme peroxidase family profile. 22 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 CDD secretory_peroxidase 22 318 IPR033905 GO:0004601|GO:0042744
Sto13g2460 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Sto13g2460 319 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PANTHER PEROXIDASE 25-RELATED 17 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto13g2460 319 PANTHER PEROXIDASE 17 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2460 Sto-Chr13 30954634 30955829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2460 21 319 Peroxidase AT1G77100 57.237 3.09e-114 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2460 K00430 - gmx:547549 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2460 13 30954634 30955829 Sto13g2460 13 30954634 30955829 ECH